RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SSX5O60225 188 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 HS6ST1O60243 411 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 FGF17O60258 216 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 DLX3O60479 287 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TNFRSF21O75509 655 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 OR2J2O76002 312 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 SCELO95171 688 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ETHE1O95571 254 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 FADS2O95864 444 aaKnown RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TGFB1P01137 390 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 LBPP18428 481 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 POU3F2P20265 443 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 CBLP22681 906 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ATP5A1P25705 553 aaKnown RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 SOX3P41225 446 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 CYB561P49447 251 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 PSMD4P55036 377 aaKnown RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 RAB10P61026 200 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 STXBP1P61764 594 aaKnown RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 EMX2Q04743 252 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 SLAMF1Q13291 335 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 DGCR6Q14129 220 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TIGD6Q17RP2 521 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 PDZK1Q5T2W1 519 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TBPL2Q6SJ96 375 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 METAP1DQ6UB28 335 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 IL20RBQ6UXL0 311 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TSPYL5Q86VY4 417 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 SLC34A3Q8N130 599 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 OR8H3Q8N146 312 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 CYP4Z2PQ8N1L4 340 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 C9orf62Q8N4C0 152 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ARL6IP6Q8N6S5 226 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TMEM178AQ8NBL3 297 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 GLB1L3Q8NCI6 653 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 CLRN3Q8NCR9 226 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 OR4M2Q8NGB6 313 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 YIPF5Q969M3 257 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 FBXW5Q969U6 566 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 REPS1Q96D71 796 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TSPAN17Q96FV3 270 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 PPP3R2Q96LZ3 170 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 COL21A1Q96P44 957 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 GPR78Q96P69 363 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 MNTQ99583 582 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 TMUB1Q9BVT8 246 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ALOXE3Q9BYJ1 711 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 CD244Q9BZW8 370 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 AMBRA1Q9C0C7 1298 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 DEFB127Q9H1M4 99 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 SEMA4BQ9NPR2 832 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 SDR39U1Q9NRG7 319 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF358Q9NW07 568 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 GPRC5BQ9NZH0 403 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 REV1Q9UBZ9 1251 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 LIPT1Q9Y234 373 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 KCNK7Q9Y2U2 307 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 MAB21L2Q9Y586 359 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 MED13LQ71F56 2210 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
HDAC6-234ENST00000493923 ACANP16112 2415 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 IQCMA0A1B0GVH7 501 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1B0GVI7 797 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 hCG_1807616A0A1W2PRN6 198 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SH3D21A4FU49 640 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 URADA6NGE7 173 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ANKDD1BA6NHY2 528 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 FAM166BA8MTA8 275 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 SUPT3HB4E1H0 165 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CTNSO60931 367 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CST1P01037 141 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CDK1P06493 297 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CELA3AP09093 270 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF3P17036 446 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 GGT1P19440 569 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 IGFBP5P24593 272 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CASP2P42575 452 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 MAP2K4P45985 399 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 MAP2K3P46734 347 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 PIK3CGP48736 1102 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 MASP1P48740 699 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 STARP49675 285 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 RAB13P51153 203 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 HSD17B7P56937 341 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 IRF8Q02556 426 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 DDX39BQ13838 428 aaKnown RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 MICAQ29983 383 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 FAM83EQ2M2I3 478 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 KRTCAP3Q53RY4 240 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 ZMAT1Q5H9K5 638 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 METTL11BQ5VVY1 283 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 C18orf63Q68DL7 685 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 LAIR2Q6ISS4 152 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 TRIM40Q6P9F5 258 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 GPRIN3Q6ZVF9 776 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 RPS27LQ71UM5 84 aaKnown RBP7.47□□□□□ -1.21
HDAC6-234ENST00000493923 KRT74Q7RTS7 529 aa7.47□□□□□ -1.21
HDAC6-234ENST00000493923 CD163Q86VB7 1156 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms