RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 VIMP08670 466 aaKnown RBP17.53■□□□□ 0.4
NELFE-212ENST00000492539 PGCP20142 388 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 PTNP21246 168 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 MATN1P21941 496 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 S100A3P33764 101 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 SOAT1P35610 550 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 CSNK2A1P68400 391 aaPredicted RBP17.53■□□□□ 0.4
NELFE-212ENST00000492539 PHC1P78364 1004 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 IRX1P78414 480 aaPredicted RBP17.53■□□□□ 0.4
NELFE-212ENST00000492539 ARHGAP11BQ3KRB8 267 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 FBXW9Q5XUX1 488 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 C6orf120Q7Z4R8 191 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 MTDHQ86UE4 582 aaKnown RBP17.53■□□□□ 0.4
NELFE-212ENST00000492539 PHC2Q8IXK0 858 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 FAM71CQ8NEG0 241 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 VPS37AQ8NEZ2 397 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 OR10H5Q8NGA6 315 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 SLC25A43Q8WUT9 341 aaPredicted RBP17.53■□□□□ 0.4
NELFE-212ENST00000492539 TMEM234Q8WY98 164 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 RHNO1Q9BSD3 238 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 ZNF350Q9GZX5 532 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 ACER3Q9NUN7 267 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 EMC3Q9P0I2 261 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 DCTN4Q9UJW0 460 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 MGAT4BQ9UQ53 548 aa17.53■□□□□ 0.4
NELFE-212ENST00000492539 HEATR1Q9H583 2144 aaKnown RBP17.53■□□□□ 0.4
NELFE-212ENST00000492539 A8MV72 311 aaPredicted RBP17.52■□□□□ 0.4
NELFE-212ENST00000492539 E7EQL1 145 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 SULT2B1O00204 365 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 GPRIN2O60269 458 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 RAD51DO75771 328 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 CYP7B1O75881 506 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 CSTAP01040 98 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 PGRP06401 933 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 TROVE2P10155 538 aaKnown RBP eCLIP17.52■□□□□ 0.4
NELFE-212ENST00000492539 TTKP33981 857 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 STX1BP61266 288 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 MERTKQ12866 999 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 TMEM108Q6UXF1 575 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 OLIG3Q7RTU3 272 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 CLECL1Q8IZS7 167 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 SLC35G5Q96KT7 338 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 ADAD1Q96M93 576 aaKnown RBP17.52■□□□□ 0.4
NELFE-212ENST00000492539 DHRS9Q9BPW9 319 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 CACNG6Q9BXT2 260 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 CBLN4Q9NTU7 201 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 MKLN1Q9UL63 735 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 SLC25A15Q9Y619 301 aa17.52■□□□□ 0.4
NELFE-212ENST00000492539 A0A0G2JND7 137 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 IL6P05231 212 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 GUSBP08236 651 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 UBTFL6P0CB48 400 aaPredicted RBP17.51■□□□□ 0.39
NELFE-212ENST00000492539 PGM1P36871 562 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 ATP4BP51164 291 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 NUDT6P53370 316 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 SPOCK1Q08629 439 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 LRRC74AQ0VAA2 488 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 MAPK14Q16539 360 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 CHRFAM7AQ494W8 412 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 C6orf52Q5T4I8 152 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 CGB2Q6NT52 195 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 EIF3MQ7L2H7 374 aaKnown RBP17.51■□□□□ 0.39
NELFE-212ENST00000492539 ANKRD46Q86W74 232 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 PIAS4Q8N2W9 510 aaPredicted RBP17.51■□□□□ 0.39
NELFE-212ENST00000492539 OR4A15Q8NGL6 344 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 MIPOL1Q8TD10 442 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 OIT3Q8WWZ8 545 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 APH1AQ96BI3 265 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 CCDC115Q96NT0 180 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 ZNF317Q96PQ6 595 aaPredicted RBP17.51■□□□□ 0.39
NELFE-212ENST00000492539 CCDC106Q9BWC9 280 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 BTNL2Q9UIR0 455 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 PCDHGB4Q9UN71 923 aa17.51■□□□□ 0.39
NELFE-212ENST00000492539 NOSIPQ9Y314 301 aaKnown RBP17.51■□□□□ 0.39
NELFE-212ENST00000492539 RNF103-CHMP3A0A140T963 221 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 FAM234BA2RU67 622 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 ELOA3DA6NLF2 546 aaPredicted RBP17.5■□□□□ 0.39
NELFE-212ENST00000492539 KIAA0513O60268 411 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 PMS2P2O95744 297 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 IGHV3-9P01782 118 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 PTAFRP25105 342 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 NTF4P34130 210 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 APOBEC1P41238 236 aaKnown RBP17.5■□□□□ 0.39
NELFE-212ENST00000492539 SLC16A1P53985 500 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 DSCR9P59020 149 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 ELOA3BQ3SY89 546 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 AP1ARQ63HQ0 302 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 TYW3Q6IPR3 259 aaKnown RBP17.5■□□□□ 0.39
NELFE-212ENST00000492539 B3GLCTQ6Y288 498 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 CLEC4FQ8N1N0 589 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 ELOA3Q8NG57 546 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 OR9I1Q8NGQ6 314 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 OR52N5Q8NH56 324 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 OR52E6Q96RD3 313 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 TMEM120AQ9BXJ8 343 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 OR51I1Q9H343 314 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 CTPS2Q9NRF8 586 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 TMEM45AQ9NWC5 275 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 TAS2R16Q9NYV7 291 aa17.5■□□□□ 0.39
NELFE-212ENST00000492539 MALT1Q9UDY8 824 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms