RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 A0A0A6YYD5 115 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 A0A1W2PNV4 684 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 METTL15A6NJ78 407 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 SDHDO14521 159 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 TMPRSS11DO60235 418 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 EEDO75530 441 aaKnown RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 SOX30O94993 753 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 PRSS23O95084 383 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 CD1DP15813 335 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 TLX1P31314 330 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 ARRB2P32121 409 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 POLR2IP36954 125 aaKnown RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 STARP49675 285 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 LHX2P50458 406 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 NKX2-5P52952 324 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 BLVRAP53004 296 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 DIO3P55073 304 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 EEF1A1P68104 462 aaKnown RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 SRYQ05066 204 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 CLCQ05315 142 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 ACAP2Q15057 778 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 EEF1A1P5Q5VTE0 462 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 STEAP3Q658P3 488 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 MED27Q6P2C8 311 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 ZNF474Q6S9Z5 364 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 OFCC1Q8IZS5 231 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 WDSUB1Q8N9V3 476 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 C17orf47Q8NEP4 570 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 HUS1BQ8NHY5 278 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 HGDQ93099 445 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 UBE2E3Q969T4 207 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 TMEM80Q96HE8 168 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 CD244Q9BZW8 370 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 OR10A5Q9H207 317 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 RHOJQ9H4E5 214 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 WDR55Q9H6Y2 383 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-213ENST00000492506 SCN3BQ9NY72 215 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 ZNF226Q9NYT6 803 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 KLHL21Q9UJP4 597 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 CFL2Q9Y281 166 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 DTX4Q9Y2E6 619 aa11.84□□□□□ -0.51
HDAC3-213ENST00000492506 A0A096LPK6 155 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ARPC4-TTLL3A0A0A6YYG9 625 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 LINC00862A6NCI5 91 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 C12orf71A8MTZ7 269 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 HCRTR2O43614 444 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ICOSLGO75144 302 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 OR7A10O76100 309 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 NPPAP01160 153 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 PRKACAP17612 351 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 S1PR1P21453 382 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 PCMT1P22061 227 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 GPX3P22352 226 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CHMP24386 653 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 BSGP35613 385 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CD79BP40259 229 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 BUD31P41223 144 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 HTR2BP41595 481 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 MRPL19P49406 292 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ARFIP1P53367 373 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 GP2P55259 537 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CLDN18P56856 261 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 NRG3P56975 720 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 RPP38P78345 283 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 AGKQ53H12 422 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 HLA-DQA1Q5Y7H0 255 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 METTL2BQ6P1Q9 378 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 VWA1Q6PCB0 445 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ENPP6Q6UWR7 440 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CYP2R1Q6VVX0 501 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 LRRC70Q7Z2Q7 622 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 PAGE2Q7Z2X7 111 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 MAGEE2Q8TD90 523 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 FBLIM1Q8WUP2 373 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 IPCEF1Q8WWN9 437 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 RPL3LQ92901 407 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ZHX1-C8orf76Q96EF9 292 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 MAP6Q96JE9 813 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 NXF5Q9H1B4 397 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 DDX31Q9H8H2 851 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CAB39LQ9H9S4 337 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 GALNT9Q9HCQ5 603 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 SERHLQ9NQF3 203 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF701Q9NV72 531 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ADPRHL2Q9NX46 363 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 MAGEL2Q9UJ55 1249 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 EXO1Q9UQ84 846 aaKnown RBP11.83□□□□□ -0.52
HDAC3-213ENST00000492506 ORC6Q9Y5N6 252 aa11.83□□□□□ -0.52
HDAC3-213ENST00000492506 CCDC154A6NI56 674 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 RNF212BA8MTL3 300 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 hCG_2039718K7EN88 272 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 PGRMC2O15173 223 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 PPM1BO75688 479 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 CBR3O75828 277 aa11.82□□□□□ -0.52
HDAC3-213ENST00000492506 AIFM1O95831 613 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms