RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	GOLGA8O	A6NCC3	632 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	CCT8L1P	A6NM43	557 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ZNF716	A6NP11	495 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	GOLGA8N	F8WBI6	632 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ATP8B1	O43520	1251 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ADAM11	O75078	769 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	BCAS1	O75363	584 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	CD8A	P01732	235 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	IGHV3-9	P01782	118 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ALDOC	P09972	364 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	HTR3A	P46098	478 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC16A1	P53985	500 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	KCNJ10	P78508	379 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	SPANXN4	Q5MJ08	99 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	KLHL17	Q6TDP4	642 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	OR52N5	Q8NH56	324 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ARL5B	Q96KC2	179 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	MAGEB18	Q96M61	343 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ADAD1	Q96M93	576 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC35A5	Q9BS91	424 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	AIG1	Q9NVV5	245 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	ASB6	Q9NWX5	421 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170	TAS2R16	Q9NYV7	291 aa		13.52	□□□□□ -0.25
MRPL55-231	ENST00000492170		E9PBE3	544 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	TLX2	O43763	284 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	NDUFS7	O75251	213 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	MRPL33	O75394	65 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	PTAFR	P25105	342 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	EPHA3	P29320	983 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	S100A3	P33764	101 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	MAGEA8	P43361	318 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	ANXA11	P50995	505 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	OR2B6	P58173	313 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	PHC1	P78364	1004 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	CHRNE	Q04844	493 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	FAM174B	Q3ZCQ3	159 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC9B1	Q4ZJI4	515 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	AP1AR	Q63HQ0	302 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC22A25	Q6T423	547 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	CASP12	Q6UXS9	341 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	DNM1P46	Q6ZS02	220 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	SPATA19	Q7Z5L4	167 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	HMGN2P46	Q86SG4	172 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	CMIP	Q8IY22	773 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	TRIML2	Q8N7C3	387 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	DYDC1	Q8WWB3	177 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	ZG16B	Q96DA0	208 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	DNAJA3	Q96EY1	480 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	OR11A1	Q9GZK7	315 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	MED4	Q9NPJ6	270 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	TMEM181	Q9P2C4	612 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	MALT1	Q9UDY8	824 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	GDF2	Q9UK05	429 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC25A15	Q9Y619	301 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	USH1C	Q9Y6N9	552 aa		13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	CHD3	Q12873	2000 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-231	ENST00000492170	ATR	Q13535	2644 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	ABCA1	O95477	2261 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CLDN24	A6NM45	220 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CD5L	O43866	347 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	SSX4	O60224	188 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	TGDS	O95455	350 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CCNA2	P20248	432 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	IDH2	P48735	452 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	ZNF83	P51522	516 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	NUDT6	P53370	316 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	TXNL4A	P83876	142 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	GNA13	Q14344	377 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	OR7E24	Q6IFN5	339 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	EPGN	Q6UW88	154 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CXXC5	Q7LFL8	322 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	ADGRG3	Q86Y34	549 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CCDC103	Q8IW40	242 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	DEPDC4	Q8N2C3	294 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	PMM1	Q92871	262 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	DDIT4L	Q96D03	193 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CCDC115	Q96NT0	180 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	TRNT1	Q96Q11	434 aa	Known RBP	13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	DHRS9	Q9BPW9	319 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	RHNO1	Q9BSD3	238 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	CACNG6	Q9BXT2	260 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	BTNL2	Q9UIR0	455 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	TRAPPC4	Q9Y296	219 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	B3GALT5	Q9Y2C3	310 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC9A8	Q9Y2E8	581 aa		13.5	□□□□□ -0.25
MRPL55-231	ENST00000492170	FBN1	P35555	2871 aa	Known RBP	13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	HMGN4	O00479	90 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	ZNF208	O43345	1280 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	EIF1B	O60739	113 aa	Known RBP	13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	UQCRB	P14927	111 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	PTN	P21246	168 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	CD40	P25942	277 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	TTK	P33981	857 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	POLR2H	P52434	150 aa	Known RBP	13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	SLC35A1	P78382	337 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	PLAUR	Q03405	335 aa		13.49	□□□□□ -0.25
MRPL55-231	ENST00000492170	RNF130	Q86XS8	419 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms