RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 ZNF524Q96C55 264 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 FBXO17Q96EF6 278 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 SORT1Q99523 831 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 C1QTNF6Q9BXI9 259 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 ACTRT3Q9BYD9 372 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 TNFRSF12AQ9NP84 129 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 FAF1Q9UNN5 650 aaPredicted RBP12.67□□□□□ -0.38
SSR4-212ENST00000491833 DNAJC15Q9Y5T4 150 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 PTGDR2Q9Y5Y4 395 aa12.67□□□□□ -0.38
SSR4-212ENST00000491833 SPIN1Q9Y657 262 aaPredicted RBP12.67□□□□□ -0.38
SSR4-212ENST00000491833 LOC390937A0A1W2PQ73 354 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 NPIPB9F8W1W9 429 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 SNNO75324 88 aaPredicted RBP12.66□□□□□ -0.38
SSR4-212ENST00000491833 MRPL33O75394 65 aaKnown RBP12.66□□□□□ -0.38
SSR4-212ENST00000491833 ZNF23P17027 643 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 ITGA2P17301 1181 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 HPCAL1P37235 193 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 ASMTP46597 345 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 MERTKQ12866 999 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 MAD2L1Q13257 205 aaPredicted RBP12.66□□□□□ -0.38
SSR4-212ENST00000491833 SKP2Q13309 424 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 RNF165Q6ZSG1 346 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 FNDC5Q8NAU1 212 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 C1orf162Q8NEQ5 155 aaPredicted RBP12.66□□□□□ -0.38
SSR4-212ENST00000491833 CKAP2Q8WWK9 683 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 TMEM234Q8WY98 164 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 NUF2Q9BZD4 464 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 PLA2G12AQ9BZM1 189 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 BPESC1Q9GZL8 116 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 BAIAP2L1Q9UHR4 511 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 DCTN4Q9UJW0 460 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 TMED5Q9Y3A6 229 aa12.66□□□□□ -0.38
SSR4-212ENST00000491833 SCAMP2O15127 329 aaKnown RBP12.65□□□□□ -0.38
SSR4-212ENST00000491833 SPRY1O43609 319 aaPredicted RBP12.65□□□□□ -0.38
SSR4-212ENST00000491833 CYP7B1O75881 506 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 TFPIP10646 304 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 PGCP20142 388 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 ARRB2P32121 409 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 FOXG1P55316 489 aaPredicted RBP12.65□□□□□ -0.38
SSR4-212ENST00000491833 SESN3P58005 492 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 SLC25A3Q00325 362 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 SWI5Q1ZZU3 235 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 SPDYE7PQ495Y7 208 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 NXNQ6DKJ4 435 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 CASP12Q6UXS9 341 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 WDR31Q8NA23 367 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 ZNF540Q8NDQ6 660 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 OR52E4Q8NGH9 312 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 OR2T11Q8NH01 316 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 C1orf159Q96HA4 380 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 C7orf26Q96N11 449 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 THUMPD3Q9BV44 507 aaKnown RBP12.65□□□□□ -0.38
SSR4-212ENST00000491833 LAT2Q9GZY6 243 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 KCNE3Q9Y6H6 103 aa12.65□□□□□ -0.38
SSR4-212ENST00000491833 SERINC4A6NH21 518 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 HDAC3O15379 428 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 DNPH1O43598 174 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 PEX11AO75192 247 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 PMS2P2O95744 297 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
SSR4-212ENST00000491833 CFPP27918 469 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 SRP14P37108 136 aaKnown RBP12.64□□□□□ -0.39
SSR4-212ENST00000491833 RPL3P39023 403 aaKnown RBP12.64□□□□□ -0.39
SSR4-212ENST00000491833 CCT3P49368 545 aaKnown RBP12.64□□□□□ -0.39
SSR4-212ENST00000491833 SLC16A1P53985 500 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 RFTN2Q52LD8 501 aaPredicted RBP12.64□□□□□ -0.39
SSR4-212ENST00000491833 XKR7Q5GH72 579 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 C9orf135Q5VTT2 229 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 KLHL24Q6TFL4 600 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 SLC46A3Q7Z3Q1 461 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 FOXN4Q96NZ1 517 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 VRK1Q99986 396 aaPredicted RBP12.64□□□□□ -0.39
SSR4-212ENST00000491833 C1orf50Q9BV19 199 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 C20orf27Q9GZN8 174 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 NMUR2Q9GZQ4 415 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 GPATCH2Q9NW75 528 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 ATP6V1HQ9UI12 483 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 HAO1Q9UJM8 370 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 MOKQ9UQ07 419 aa12.64□□□□□ -0.39
SSR4-212ENST00000491833 ARFGEF3Q5TH69 2177 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 PDLIM1O00151 329 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 LSM1O15116 133 aaKnown RBP12.63□□□□□ -0.39
SSR4-212ENST00000491833 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
SSR4-212ENST00000491833 DNAJA2O60884 412 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 WNT11O96014 354 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 CSTAP01040 98 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
SSR4-212ENST00000491833 TROVE2P10155 538 aaKnown RBP eCLIP12.63□□□□□ -0.39
SSR4-212ENST00000491833 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
SSR4-212ENST00000491833 MAGEA8P43361 318 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 GUCY1A3Q02108 690 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
SSR4-212ENST00000491833 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms