RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 HBA1P69905 142 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 LGALS3BPQ08380 585 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 FUT5Q11128 374 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 SLC17A1Q14916 467 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 TRIP10Q15642 601 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 CFAP157Q5JU67 520 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 AP1ARQ63HQ0 302 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 R3HCC1LQ7Z5L2 792 aaKnown RBP11.49□□□□□ -0.57
USF1-206ENST00000491629 HMGN2P46Q86SG4 172 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 MYPOPQ86VE0 399 aaPredicted RBP11.49□□□□□ -0.57
USF1-206ENST00000491629 RIMKLAQ8IXN7 391 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 KIF18AQ8NI77 898 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 TMEM234Q8WY98 164 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 BOD1Q96IK1 185 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 GATA5Q9BWX5 397 aaPredicted RBP11.49□□□□□ -0.57
USF1-206ENST00000491629 ZNF350Q9GZX5 532 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
USF1-206ENST00000491629 CA10Q9NS85 328 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 HDGFL3Q9Y3E1 203 aa11.49□□□□□ -0.57
USF1-206ENST00000491629 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 CMYA5Q8N3K9 4069 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 TMEM129A0AVI4 362 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 ZC3H12DA2A288 527 aaKnown RBP11.48□□□□□ -0.57
USF1-206ENST00000491629 PRAMEF27A3QJZ7 478 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 CLDN24A6NM45 220 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 DNPH1O43598 174 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 GLRA3O75311 464 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 CHRNGP07510 517 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 OR4A8P0C604 315 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 CCNA2P20248 432 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 MPGP29372 298 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 RYKP34925 604 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 HPCAL1P37235 193 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 MAGEA8P43361 318 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 OR2B6P58173 313 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 PRPS1P60891 318 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 SNRPD2P62316 118 aaKnown RBP11.48□□□□□ -0.57
USF1-206ENST00000491629 EFNB3Q15768 340 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 ARHGAP11BQ3KRB8 267 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 ATP6AP1LQ52LC2 224 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 EMBQ6PCB8 327 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 EIF3MQ7L2H7 374 aaKnown RBP11.48□□□□□ -0.57
USF1-206ENST00000491629 LINGO2Q7L985 606 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 SLC46A3Q7Z3Q1 461 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 SPATA19Q7Z5L4 167 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 C3orf30Q96M34 536 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 ZNF385AQ96PM9 386 aaKnown RBP11.48□□□□□ -0.57
USF1-206ENST00000491629 SLC38A2Q96QD8 506 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 C1orf50Q9BV19 199 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 NELFAQ9H3P2 528 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 TMEM181Q9P2C4 612 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 PSMC3IPQ9P2W1 217 aaPredicted RBP11.48□□□□□ -0.57
USF1-206ENST00000491629 UPB1Q9UBR1 384 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 TRAPPC4Q9Y296 219 aa11.48□□□□□ -0.57
USF1-206ENST00000491629 TMEM72A0PK05 275 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 B9A039 149 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 LYNX1G3V0Z9 82 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 NR5A2O00482 541 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 AP3D1O14617 1153 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 PIP5K1BO14986 540 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 STX11O75558 287 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 C1QCP02747 245 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 KRT16P08779 473 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 LYNX1P0DP58 116 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 CPA3P15088 417 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 DDX5P17844 614 aaKnown RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 CDH2P19022 906 aaPredicted RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 MATN1P21941 496 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 APEX1P27695 318 aaKnown RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 ARRB2P32121 409 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 COMPP49747 757 aaPredicted RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 PPOXP50336 477 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 IDH3GP51553 393 aaPredicted RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 CDH15P55291 814 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 HGFACQ04756 655 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 CKAP4Q07065 602 aaKnown RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 RIN1Q13671 783 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 PCLAFQ15004 111 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 XKR7Q5GH72 579 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 TYW3Q6IPR3 259 aaKnown RBP11.47□□□□□ -0.57
USF1-206ENST00000491629 RINLQ6ZS11 566 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 GRINAQ7Z429 371 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 C6orf120Q7Z4R8 191 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 C10orf107Q8IVU9 208 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 CLECL1Q8IZS7 167 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 LINC01356Q8N9X3 169 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 TWIST2Q8WVJ9 160 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 TMEM45BQ96B21 275 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 ZHX1-C8orf76Q96EF9 292 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 TXLNGYQ9BZA5 131 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 SLC9A8Q9Y2E8 581 aa11.47□□□□□ -0.57
USF1-206ENST00000491629 ANKRD28O15084 1053 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 PEX11AO75192 247 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 FGF4P08620 206 aa11.46□□□□□ -0.57
USF1-206ENST00000491629 FAM153BP0C7A2 387 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms