RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TMEM181Q9P2C4 612 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 GIMAP2Q9UG22 337 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 TRAPPC4Q9Y296 219 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 FLVCR1Q9Y5Y0 555 aa18.04■□□□□ 0.48
CLIP2-208ENST00000491075 COPEO14579 308 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 EIF1BO60739 113 aaKnown RBP18.03■□□□□ 0.48
CLIP2-208ENST00000491075 TRIM13O60858 407 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 PEX11AO75192 247 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 PRPS1L1P21108 318 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 MPGP29372 298 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 OR2B6P58173 313 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 PCLAFQ15004 111 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 UGT3A2Q3SY77 523 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 ATP6AP1LQ52LC2 224 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 XKR7Q5GH72 579 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 SLC46A3Q7Z3Q1 461 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 SLC35G5Q96KT7 338 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 DUSP26Q9BV47 211 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 EXD2Q9NVH0 621 aa18.03■□□□□ 0.48
CLIP2-208ENST00000491075 CHRNGP07510 517 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 TSPO2Q5TGU0 170 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 C6orf120Q7Z4R8 191 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 MEX3DQ86XN8 651 aaKnown RBP18.02■□□□□ 0.48
CLIP2-208ENST00000491075 KRTCAP2Q8N6L1 136 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 VRK1Q99986 396 aaPredicted RBP18.02■□□□□ 0.48
CLIP2-208ENST00000491075 KCNS3Q9BQ31 491 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 C1orf50Q9BV19 199 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 TXLNGYQ9BZA5 131 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 BPESC1Q9GZL8 116 aa18.02■□□□□ 0.48
CLIP2-208ENST00000491075 PDE5AO76074 875 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 AGR2O95994 175 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 GUSBP08236 651 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 RYKP34925 604 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 SERPINF1P36955 418 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 SLC35A1P78382 337 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 RUNX1T1Q06455 604 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 MAPK14Q16539 360 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 FAM153CQ494X1 144 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 EMBQ6PCB8 327 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 OLIG3Q7RTU3 272 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 ADGRG3Q86Y34 549 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 RIMKLAQ8IXN7 391 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 IFT20Q8IY31 132 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 ANKS4BQ8N8V4 417 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 BOD1Q96IK1 185 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-208ENST00000491075 NAA11Q9BSU3 229 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-208ENST00000491075 OBP2BQ9NPH6 170 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 EXOSC3Q9NQT5 275 aaKnown RBP18.01■□□□□ 0.47
CLIP2-208ENST00000491075 POLE3Q9NRF9 147 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 CA10Q9NS85 328 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 PCDHGB4Q9UN71 923 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 WDR45Q9Y484 360 aa18.01■□□□□ 0.47
CLIP2-208ENST00000491075 RNF103-CHMP3A0A140T963 221 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 B9A039 149 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 NPHS1O60500 1241 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 BCAS1O75363 584 aaPredicted RBP18■□□□□ 0.47
CLIP2-208ENST00000491075 HTR3AP46098 478 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 SLC17A1Q14916 467 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 C6orf136Q5SQH8 315 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 ATAD3BQ5T9A4 648 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 IL23RQ5VWK5 629 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 ARFGAP2Q8N6H7 521 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 FNDC5Q8NAU1 212 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 MIPOL1Q8TD10 442 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 TMEM45BQ96B21 275 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 DDIT4LQ96D03 193 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 KATNB1Q9BVA0 655 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 OR51I1Q9H343 314 aa18■□□□□ 0.47
CLIP2-208ENST00000491075 FBXO9Q9UK97 447 aaPredicted RBP18■□□□□ 0.47
CLIP2-208ENST00000491075 TENM1Q9UKZ4 2725 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 IGHV1-18A0A0C4DH31 117 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 FAM153BP0C7A2 387 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 ITGA2P17301 1181 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 KRT4P19013 534 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 PAX7P23759 505 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 PPOXP50336 477 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 AP1ARQ63HQ0 302 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 TYW3Q6IPR3 259 aaKnown RBP17.99■□□□□ 0.47
CLIP2-208ENST00000491075 PAQR6Q6TCH4 344 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 SPATA19Q7Z5L4 167 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 ABHD12BQ7Z5M8 362 aaPredicted RBP17.99■□□□□ 0.47
CLIP2-208ENST00000491075 POMGNT2Q8NAT1 580 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 PMM1Q92871 262 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 C1orf159Q96HA4 380 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 SLC38A2Q96QD8 506 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 SOX7Q9BT81 388 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 PPCSQ9HAB8 311 aa17.99■□□□□ 0.47
CLIP2-208ENST00000491075 TMED7-TICAM2A0A0A6YYA0 188 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 ZNF208O43345 1280 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 CRYAAP02489 173 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 CDH2P19022 906 aaPredicted RBP17.98■□□□□ 0.47
CLIP2-208ENST00000491075 CCNA2P20248 432 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 GIFP27352 417 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 SRP14P37108 136 aaKnown RBP17.98■□□□□ 0.47
CLIP2-208ENST00000491075 IDH2P48735 452 aaKnown RBP17.98■□□□□ 0.47
CLIP2-208ENST00000491075 CHN2P52757 468 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 EFNB3Q15768 340 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 PGS1Q32NB8 556 aa17.98■□□□□ 0.47
CLIP2-208ENST00000491075 HIKESHIQ53FT3 197 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms