RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NR5A2O00482 541 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 HNRNPCL1O60812 293 aaKnown RBP27.77■■■□□ 2.04
LDB1-204ENST00000490751 PLAUP00749 431 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 THBS1P07996 1170 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 HNRNPCL4P0DMR1 293 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 NKX6-1P78426 367 aaPredicted RBP27.77■■■□□ 2.04
LDB1-204ENST00000490751 FADDQ13158 208 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 LARS2Q15031 903 aaKnown RBP27.77■■■□□ 2.04
LDB1-204ENST00000490751 RNF220Q5VTB9 566 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 SPDL1Q96EA4 605 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 ADAM19Q9H013 955 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 VIPAS39Q9H9C1 493 aa27.77■■■□□ 2.04
LDB1-204ENST00000490751 CACYBPQ9HB71 228 aaKnown RBP27.77■■■□□ 2.04
LDB1-204ENST00000490751 ZC3H12DA2A288 527 aaKnown RBP27.76■■■□□ 2.03
LDB1-204ENST00000490751 RAMP1O60894 148 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 SMPD2O60906 423 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 LYZL6O75951 148 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 IMPDH2P12268 514 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 ACAA2P42765 397 aaKnown RBP27.76■■■□□ 2.03
LDB1-204ENST00000490751 CCDC103Q8IW40 242 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 CLIP4Q8N3C7 705 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 HSD17B8Q92506 261 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 MAL2Q969L2 176 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 POTEKPQ9BYX7 375 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 A4GALTQ9NPC4 353 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 SLC25A37Q9NYZ2 338 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 ZNF232Q9UNY5 417 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 NOSIPQ9Y314 301 aaKnown RBP27.76■■■□□ 2.03
LDB1-204ENST00000490751 MTORP42345 2549 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 VPS13CQ709C8 3753 aa27.76■■■□□ 2.03
LDB1-204ENST00000490751 BMP2P12643 396 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 H2AFXP16104 143 aaPredicted RBP27.75■■■□□ 2.03
LDB1-204ENST00000490751 MAP2K6P52564 334 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 ZSWIM7Q19AV6 140 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 LRIF1Q5T3J3 769 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 MSRB3Q8IXL7 192 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 CADM2Q8N3J6 435 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 USB1Q9BQ65 265 aaKnown RBP27.75■■■□□ 2.03
LDB1-204ENST00000490751 TMEM204Q9BSN7 226 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 SPATA9Q9BWV2 254 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 DLL4Q9NR61 685 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 SLAMF8Q9P0V8 285 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 CHST2Q9Y4C5 530 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 ROS1P08922 2347 aa27.75■■■□□ 2.03
LDB1-204ENST00000490751 C2CD3Q4AC94 2353 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 GPR171O14626 319 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 CNOT4O95628 575 aaKnown RBP27.74■■■□□ 2.03
LDB1-204ENST00000490751 IGHV1-2P23083 117 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 SLC16A1P53985 500 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 SLC35A1P78382 337 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 H3F3AP84243 136 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 CAPRIN1Q14444 709 aaKnown RBP27.74■■■□□ 2.03
LDB1-204ENST00000490751 PAGE3Q5JUK9 113 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 SHEQ5VZ18 495 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 LRRC75A-AS1Q8N1F1 130 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 CKAP2Q8WWK9 683 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 BCL2L10Q9HD36 194 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 SLC52A3Q9NQ40 469 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 IFT52Q9Y366 437 aa27.74■■■□□ 2.03
LDB1-204ENST00000490751 ACANP16112 2415 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 FLNAP21333 2647 aaKnown RBP27.73■■■□□ 2.03
LDB1-204ENST00000490751 EIF1BO60739 113 aaKnown RBP27.73■■■□□ 2.03
LDB1-204ENST00000490751 IGHV3-9P01782 118 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 PRG2P13727 222 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 COX5AP20674 150 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 CXCR1P25024 350 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 ATP4BP51164 291 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 COPZ1P61923 177 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 AGKQ53H12 422 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 PRAMEF8Q5VWM4 474 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 PRAMEF7Q5VXH5 474 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 WBP2NLQ6ICG8 309 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 P3H2Q8IVL5 708 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 BBS10Q8TAM1 723 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 APH1AQ96BI3 265 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 MAGEB18Q96M61 343 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 ARMC7Q9H6L4 198 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 NGBQ9NPG2 151 aa27.73■■■□□ 2.03
LDB1-204ENST00000490751 C5orf58C9J3I9 102 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 NCF2P19878 526 aaPredicted RBP27.72■■■□□ 2.03
LDB1-204ENST00000490751 SQLEQ14534 574 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 STK11Q15831 433 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 ZNF311Q5JNZ3 666 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 FBXW9Q5XUX1 488 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 SERPINA11Q86U17 422 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 UBE2J2Q8N2K1 259 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 NAA11Q9BSU3 229 aaPredicted RBP27.72■■■□□ 2.03
LDB1-204ENST00000490751 PRDM4Q9UKN5 801 aa27.72■■■□□ 2.03
LDB1-204ENST00000490751 ARHGEF9O43307 516 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 NTF4P34130 210 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 IDUAP35475 653 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 IRX1P78414 480 aaPredicted RBP27.71■■■□□ 2.03
LDB1-204ENST00000490751 Q5PR19 223 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 NCMAPQ5T1S8 102 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 SEZ6L2Q6UXD5 910 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 THOC1Q96FV9 657 aaKnown RBP27.71■■■□□ 2.03
LDB1-204ENST00000490751 ESRP2Q9H6T0 727 aaKnown RBP27.71■■■□□ 2.03
LDB1-204ENST00000490751 TMEM45AQ9NWC5 275 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 VAPAQ9P0L0 249 aa27.71■■■□□ 2.03
LDB1-204ENST00000490751 RNF115Q9Y4L5 304 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms