RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CA10Q9NS85 328 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PARPBPQ9NWS1 579 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 CHRNA9Q9UGM1 479 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 DCDC2Q9UHG0 476 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 BAIAP2L1Q9UHR4 511 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 TMEFF2Q9UIK5 374 aaPredicted RBP7.14□□□□□ -1.27
USP39-216ENST00000490193 KCNE5Q9UJ90 142 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PYCARDQ9ULZ3 195 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 MOKQ9UQ07 419 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 TRAPPC4Q9Y296 219 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 SLC9A8Q9Y2E8 581 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 PTGDR2Q9Y5Y4 395 aa7.14□□□□□ -1.27
USP39-216ENST00000490193 IGHV1-18A0A0C4DH31 117 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 CENPVL1A0A0U1RR11 272 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 EIF1BO60739 113 aaKnown RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 LILRA1O75019 489 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 GLRA3O75311 464 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 STX11O75558 287 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 UGT2B17O75795 530 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 WNT11O96014 354 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 AK1P00568 194 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 CSTAP01040 98 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 PROCP04070 461 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 GUSBP08236 651 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 BCKDHAP12694 445 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 EGR1P18146 543 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 EFNA1P20827 205 aaPredicted RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 PCMT1P22061 227 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 SERPINF1P36955 418 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 SRP14P37108 136 aaKnown RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 HPCAL1P37235 193 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 MAGEA8P43361 318 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 KHKP50053 298 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 IDH3GP51553 393 aaPredicted RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 DVL1P1P54792 670 aaPredicted RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 CDH15P55291 814 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 ETF1P62495 437 aaKnown RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 RPL38P63173 70 aaKnown RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 TP53BP2Q13625 1128 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 SLC17A1Q14916 467 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 ADIPOQQ15848 244 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 C3orf36Q3SXR2 165 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 FAM174BQ3ZCQ3 159 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 GLIPR1L2Q4G1C9 344 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 TSPO2Q5TGU0 170 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 BHLHB9Q6PI77 547 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 KLHL24Q6TFL4 600 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 CASP12Q6UXS9 341 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 EIF3MQ7L2H7 374 aaKnown RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 VASH1Q7L8A9 365 aaPredicted RBP7.13□□□□□ -1.27
USP39-216ENST00000490193 SLC46A3Q7Z3Q1 461 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 GRINAQ7Z429 371 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 CCDC103Q8IW40 242 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 ANKS4BQ8N8V4 417 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 LINC01356Q8N9X3 169 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 TMEM45BQ96B21 275 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 ZNF350Q9GZX5 532 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 TUBB1Q9H4B7 451 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 CTPS2Q9NRF8 586 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 UPB1Q9UBR1 384 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 FLVCR1Q9Y5Y0 555 aa7.13□□□□□ -1.27
USP39-216ENST00000490193 LRP5LA4QPB2 252 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 DUXAA6NLW8 204 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 TMEM114B3SHH9 223 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 AZIN1O14977 448 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 PLIN3O60664 434 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 FCMRO60667 390 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 VENTXO95231 258 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 UBTFL6P0CB48 400 aaPredicted RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 TFPIP10646 304 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 LAMP1P11279 417 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 APEX1P27695 318 aaKnown RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 CASQ1P31415 396 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 IL2RGP31785 369 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 PGM1P36871 562 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 CKAP4Q07065 602 aaKnown RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 RIN1Q13671 783 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 CARTPTQ16568 116 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 ARHGAP11BQ3KRB8 267 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 LSM12Q3MHD2 195 aaKnown RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 CCDC153Q494R4 210 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 CFAP157Q5JU67 520 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 C9orf135Q5VTT2 229 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 LIPMQ5VYY2 423 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 KANK2Q63ZY3 851 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 ADGRG3Q86Y34 549 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 ZNF786Q8N393 782 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 POMGNT2Q8NAT1 580 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 OR7A2PQ8NGA2 310 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 OR5D16Q8NGK9 328 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 NEU4Q8WWR8 484 aaPredicted RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 COQ8BQ96D53 544 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 ZNF317Q96PQ6 595 aaPredicted RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 SLC38A2Q96QD8 506 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 VRK1Q99986 396 aaPredicted RBP7.12□□□□□ -1.27
USP39-216ENST00000490193 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 SAP130Q9H0E3 1048 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 RAB1BQ9H0U4 201 aa7.12□□□□□ -1.27
USP39-216ENST00000490193 SERHL2Q9H4I8 314 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms