RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CALCBP10092 127 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 NPR2P20594 1047 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 MAGP20916 626 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 CXCR2P25025 360 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 CSNK1DP48730 415 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 DAP3P51398 398 aaKnown RBP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 AP3M2P53677 418 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 HSD17B7P56937 341 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 PFN3P60673 137 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 CSTF1Q05048 431 aaKnown RBP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 PSG5Q15238 335 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 TSPO2Q5TGU0 170 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 ACOT1Q86TX2 421 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 CENPLQ8N0S6 344 aaPredicted RBP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 ATP6V0D2Q8N8Y2 350 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 FADS6Q8N9I5 356 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 RIT2Q99578 217 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 OR11A1Q9GZK7 315 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 TMEM117Q9H0C3 514 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 EML4Q9HC35 981 aaKnown RBP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 PHF11Q9UIL8 331 aa2.99□□□□□ -1.93
CCDC39-206ENST00000489868 AK6Q9Y3D8 172 aaKnown RBP2.99□□□□□ -1.93
CCDC39-206ENST00000489868 ASTN1O14525 1302 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 CXCL13O43927 109 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 KIAA0754O94854 1291 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 STAMBPO95630 424 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 CRISP2P16562 243 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 OTX2P32243 289 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 SHMT2P34897 504 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 SUCLG1P53597 346 aaKnown RBP2.98□□□□□ -1.93
CCDC39-206ENST00000489868 GRB7Q14451 532 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 INAQ16352 499 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 BCL7AQ4VC05 210 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 PYHIN1Q6K0P9 492 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 C6orf89Q6UWU4 347 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 OR2L13Q8N349 312 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 DHRSXQ8N5I4 330 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 RAET1EQ8TD07 263 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 FGF11Q92914 225 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 HIST1H4GQ99525 98 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 SELENOIQ9C0D9 397 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 NUDT15Q9NV35 164 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 AATFQ9NY61 560 aaKnown RBP eCLIP2.98□□□□□ -1.93
CCDC39-206ENST00000489868 CHRNA9Q9UGM1 479 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 TBK1Q9UHD2 729 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 MAD1L1Q9Y6D9 718 aa2.98□□□□□ -1.93
CCDC39-206ENST00000489868 ATP8B3O60423 1300 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 MAP3K15Q6ZN16 1313 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 IGLV4-69A0A075B6H9 119 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 A0A1W2PNV4 684 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 LRCOL1A6NCL2 159 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 PPIAL4DF5H284 164 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 CLDN3O15551 220 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 GIPP09681 153 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 ICAM2P13598 275 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 NCF1P14598 390 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 KPNA2P52292 529 aaKnown RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 EIF4EBP1Q13541 118 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 SLC25A52Q3SY17 297 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 OR2G6Q5TZ20 316 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 TMEM61Q8N0U2 210 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 CLDN19Q8N6F1 224 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 STXBP6Q8NFX7 210 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 NPBQ8NG41 125 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 OR10G3Q8NGC4 313 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 SPRYD4Q8WW59 207 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 NDRG1Q92597 394 aaKnown RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 MRPS31Q92665 395 aaKnown RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 FAM210BQ96KR6 192 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 GPA33Q99795 319 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 ZNF416Q9BWM5 594 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 SUDS3Q9H7L9 328 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 PLGRKTQ9HBL7 147 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 SLC17A5Q9NRA2 495 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 IL36GQ9NZH8 169 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 STOX2Q9P2F5 926 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-206ENST00000489868 STAP1Q9ULZ2 295 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 TRAPPC4Q9Y296 219 aa2.97□□□□□ -1.93
CCDC39-206ENST00000489868 PTCH1Q13635 1447 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 TRDCB7Z8K6 153 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 C11orf94C9JXX5 98 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 NBR2O15453 112 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 MBTPS2O43462 519 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 LGALS2P05162 132 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 HNRNPA2B1P22626 353 aaKnown RBP2.96□□□□□ -1.94
CCDC39-206ENST00000489868 UQCRC2P22695 453 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 PAX7P23759 505 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 CA8P35219 290 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 CCDC57Q2TAC2 916 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 NCR3LG1Q68D85 454 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 TMIGD1Q6UXZ0 262 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 ZNF621Q6ZSS3 439 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 LINC01551Q86U37 167 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 ZNF573Q86YE8 665 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 FTMTQ8N4E7 242 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 OR6C4Q8NGE1 309 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 OR9G1Q8NH87 305 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 FANK1Q8TC84 345 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 AMDHD1Q96NU7 426 aa2.96□□□□□ -1.94
CCDC39-206ENST00000489868 NIPSNAP3BQ9BS92 247 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms