RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 TMEM19Q96HH6 336 aa21.5■■□□□ 1.03
COPS9-203ENST00000489698 EBF4Q9BQW3 602 aa21.5■■□□□ 1.03
COPS9-203ENST00000489698 CACYBPQ9HB71 228 aaKnown RBP21.5■■□□□ 1.03
COPS9-203ENST00000489698 NGBQ9NPG2 151 aa21.5■■□□□ 1.03
COPS9-203ENST00000489698 PCDHB14Q9Y5E9 798 aa21.5■■□□□ 1.03
COPS9-203ENST00000489698 CDHR4A6H8M9 788 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 TGDSO95455 350 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 PDK3Q15120 406 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 LRRC75A-AS1Q8N1F1 130 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 CADM2Q8N3J6 435 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 GOLGA6L1Q8N7Z2 621 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 AKAP1Q92667 903 aaKnown RBP eCLIP21.49■■□□□ 1.03
COPS9-203ENST00000489698 TMEM204Q9BSN7 226 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 POTEKPQ9BYX7 375 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 PAIP1Q9H074 479 aaKnown RBP21.49■■□□□ 1.03
COPS9-203ENST00000489698 THUMPD1Q9NXG2 353 aaKnown RBP21.49■■□□□ 1.03
COPS9-203ENST00000489698 ZNF232Q9UNY5 417 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 TRAPPC4Q9Y296 219 aa21.49■■□□□ 1.03
COPS9-203ENST00000489698 ZNF443Q9Y2A4 671 aaPredicted RBP21.49■■□□□ 1.03
COPS9-203ENST00000489698 IGKV3D-15A0A087WSY6 115 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 ZNF716A6NP11 495 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 CLIC1O00299 241 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 FAAHO00519 579 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 CLOCKO15516 846 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 ZNF208O43345 1280 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 DNPH1O43598 174 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 RAMP1O60894 148 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 IGHV1-2P23083 117 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 AQP5P55064 265 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 SLC35A1P78382 337 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 LTBQ06643 244 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 LARS2Q15031 903 aaKnown RBP21.48■■□□□ 1.03
COPS9-203ENST00000489698 Q71RC1 249 aaPredicted RBP21.48■■□□□ 1.03
COPS9-203ENST00000489698 APH1AQ96BI3 265 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 USB1Q9BQ65 265 aaKnown RBP21.48■■□□□ 1.03
COPS9-203ENST00000489698 NAA11Q9BSU3 229 aaPredicted RBP21.48■■□□□ 1.03
COPS9-203ENST00000489698 ESRP2Q9H6T0 727 aaKnown RBP21.48■■□□□ 1.03
COPS9-203ENST00000489698 DSPPQ9NZW4 1301 aa21.48■■□□□ 1.03
COPS9-203ENST00000489698 A0A0G2JPF8 293 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 ZC3H12DA2A288 527 aaKnown RBP21.47■■□□□ 1.03
COPS9-203ENST00000489698 HNRNPCL2B2RXH8 293 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 HNRNPCL3B7ZW38 293 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 NR5A2O00482 541 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 GPR171O14626 319 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 HS3ST1O14792 307 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 HNRNPCL1O60812 293 aaKnown RBP21.47■■□□□ 1.03
COPS9-203ENST00000489698 CD3EP07766 207 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 NUDT7P0C024 238 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 HNRNPCL4P0DMR1 293 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 IMPDH2P12268 514 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 CXCR1P25024 350 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 COPZ1P61923 177 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 RGNQ15493 299 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 BIVMQ86UB2 503 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 CLIP4Q8N3C7 705 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 TMEM171Q8WVE6 324 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 SMR3AQ99954 134 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 CCDC28BQ9BUN5 200 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 ADAM19Q9H013 955 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 RAD21L1Q9H4I0 556 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 CCDC167Q9P0B6 97 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 RNF115Q9Y4L5 304 aa21.47■■□□□ 1.03
COPS9-203ENST00000489698 A0A096LPI6 279 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 MRPL33O75394 65 aaKnown RBP21.46■■□□□ 1.03
COPS9-203ENST00000489698 NCF2P19878 526 aaPredicted RBP21.46■■□□□ 1.03
COPS9-203ENST00000489698 ACAA2P42765 397 aaKnown RBP21.46■■□□□ 1.03
COPS9-203ENST00000489698 NCMAPQ5T1S8 102 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 FBXW9Q5XUX1 488 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 YTHDF3Q7Z739 585 aaKnown RBP21.46■■□□□ 1.03
COPS9-203ENST00000489698 ATG4DQ86TL0 474 aaPredicted RBP21.46■■□□□ 1.03
COPS9-203ENST00000489698 FUNDC1Q8IVP5 155 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 MAL2Q969L2 176 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 MUCL1Q96DR8 90 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 SPDL1Q96EA4 605 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 C18orf12Q96KH6 178 aa21.46■■□□□ 1.03
COPS9-203ENST00000489698 INTS9Q9NV88 658 aaKnown RBP21.46■■□□□ 1.03
COPS9-203ENST00000489698 USF3Q68DE3 2245 aa21.45■■□□□ 1.03
COPS9-203ENST00000489698 C5orf58C9J3I9 102 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 EIF1BO60739 113 aaKnown RBP21.45■■□□□ 1.02
COPS9-203ENST00000489698 CNOT4O95628 575 aaKnown RBP21.45■■□□□ 1.02
COPS9-203ENST00000489698 THBS1P07996 1170 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 GGT1P19440 569 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 ADSLP30566 484 aaPredicted RBP21.45■■□□□ 1.02
COPS9-203ENST00000489698 MRPL19P49406 292 aaKnown RBP21.45■■□□□ 1.02
COPS9-203ENST00000489698 MAP2K6P52564 334 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 PPA1Q15181 289 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 ZNF311Q5JNZ3 666 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 RNF220Q5VTB9 566 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 WBP2NLQ6ICG8 309 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 BLOC1S3Q6QNY0 202 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 HDXQ7Z353 690 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 ZNF611Q8N823 705 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 Q96MF0 132 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 SPATA9Q9BWV2 254 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 ARMC7Q9H6L4 198 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 CADP27708 2225 aa21.45■■□□□ 1.02
COPS9-203ENST00000489698 NSD1Q96L73 2696 aaPredicted RBP21.44■■□□□ 1.02
COPS9-203ENST00000489698 CIB4A0PJX0 185 aa21.44■■□□□ 1.02
COPS9-203ENST00000489698 CCT8L1PA6NM43 557 aa21.44■■□□□ 1.02
COPS9-203ENST00000489698 RAD51DO75771 328 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms