RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ELOA3DA6NLF2 546 aaPredicted RBP11.58□□□□□ -0.56
NELFE-209ENST00000488426 CLCA1A8K7I4 914 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 EFCAB9A8MZ26 197 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 C21orf140B9A014 251 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 M0R129 80 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 KPNA4O00629 521 aaPredicted RBP11.58□□□□□ -0.56
NELFE-209ENST00000488426 RGS10O43665 173 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 SCO2O43819 266 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 HCN1O60741 890 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 ZNF354AO60765 605 aaPredicted RBP11.58□□□□□ -0.56
NELFE-209ENST00000488426 RCBTB2O95199 551 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
NELFE-209ENST00000488426 PTNP21246 168 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 DLSTP36957 453 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 SLC1A3P43003 542 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 P2RX1P51575 399 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 FBXW4P57775 412 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 CBFBQ13951 182 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 OCLNQ16625 522 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 ELOA3BQ3SY89 546 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 MEDAGQ5VYS4 303 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 FOXB2Q5VYV0 432 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 ACSM5Q6NUN0 579 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 LYPD8Q6UX82 237 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 PRSS48Q7RTY5 328 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 PPP1R32Q7Z5V6 425 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 SVOPQ8N4V2 548 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 ELOA3Q8NG57 546 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 OR2T33Q8NG76 320 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 OR52L1Q8NGH7 329 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 ZNF563Q8TA94 476 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 FANK1Q8TC84 345 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 SGCDQ92629 289 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 SH3YL1Q96HL8 342 aaPredicted RBP11.58□□□□□ -0.56
NELFE-209ENST00000488426 TSSK6Q9BXA6 273 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 GPR87Q9BY21 358 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 ADAM19Q9H013 955 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 HHATLQ9HCP6 504 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 FKBP14Q9NWM8 211 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 TVP23BQ9NYZ1 205 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 MED13Q9UHV7 2174 aa11.58□□□□□ -0.56
NELFE-209ENST00000488426 A0A1B0GVG6 124 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 ADAM10O14672 748 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 CDC40O60508 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
NELFE-209ENST00000488426 OR2J2O76002 312 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 ITGB2P05107 769 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 ICAM2P13598 275 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SUMO3P55854 103 aaPredicted RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 RPS18P62269 152 aaKnown RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 EFNB1P98172 346 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 C17orf67Q0P5P2 114 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 NFATC3Q12968 1075 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 NTRK2Q16620 822 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 PGGHGQ32M88 737 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 GPR141Q7Z602 305 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 TCEANCQ8N8B7 351 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SIGLEC11Q96RL6 698 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 IL4I1Q96RQ9 567 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 RASL10BQ96S79 203 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 ARHGAP9Q9BRR9 750 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 CCDC90BQ9GZT6 254 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 OR52D1Q9H346 318 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 CNOT2Q9NZN8 540 aaKnown RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 ERVK-18Q9QC07 812 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SIGLEC7Q9Y286 467 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 PCDHGB6Q9Y5F9 930 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 EFCAB10A6NFE3 127 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 HPP00738 406 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 HMGN1P05114 100 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 PLA2G2AP14555 144 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 BMP7P18075 431 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 MST1P26927 711 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SLC9A3P48764 834 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 MVKQ03426 396 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 CRYZQ08257 329 aaKnown RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 DNASE1L3Q13609 305 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 NEDD8Q15843 81 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SNAPC1Q16533 368 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 DEFB109BQ30KR1 87 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 ZBED5Q49AG3 693 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 XAF1Q6GPH4 301 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SMARCD3Q6STE5 483 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 AHSA2Q719I0 299 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 DND1Q8IYX4 353 aaKnown RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 CYP4Z2PQ8N1L4 340 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 ARMC10Q8N2F6 343 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 OR5M3Q8NGP4 307 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 OR13C2Q8NGS9 318 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 TMEM163Q8TC26 289 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SPACA9Q96E40 222 aaPredicted RBP11.57□□□□□ -0.56
NELFE-209ENST00000488426 SGTBQ96EQ0 304 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 SAMD8Q96LT4 415 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 COPS4Q9BT78 406 aa11.57□□□□□ -0.56
NELFE-209ENST00000488426 B8ZZF3 427 aa11.56□□□□□ -0.56
NELFE-209ENST00000488426 PRKYO43930 277 aa11.56□□□□□ -0.56
NELFE-209ENST00000488426 PIPP12273 146 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms