RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PBX4Q9BYU1 374 aa13.14□□□□□ -0.31
RER1-207ENST00000488353 KLHL31Q9H511 634 aa13.14□□□□□ -0.31
RER1-207ENST00000488353 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
RER1-207ENST00000488353 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
RER1-207ENST00000488353 SCN2AQ99250 2005 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 FLRT2O43155 660 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 REM1O75628 298 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 CHRM4P08173 479 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 MAPK3P27361 379 aaPredicted RBP13.13□□□□□ -0.31
RER1-207ENST00000488353 SSR2P43308 183 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 DLX5P56178 289 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 GMFBP60983 142 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
RER1-207ENST00000488353 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 PIP5KL1Q5T9C9 394 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 NHLRC1Q6VVB1 395 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 OR10H4Q8NGA5 316 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 SUN3Q8TAQ9 357 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 ZNF671Q8TAW3 534 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
RER1-207ENST00000488353 AMDHD1Q96NU7 426 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 BBS4Q96RK4 519 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 KXD1Q9BQD3 176 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 PELI2Q9HAT8 420 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 KCNE3Q9Y6H6 103 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 A0A1W2PS29 197 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 LINC01565O15544 149 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 ZNF749O43361 778 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 VEGFDO43915 354 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 KAT7O95251 611 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 NDUFV2P19404 249 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 ACVR1BP36896 505 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 LGALS3BPQ08380 585 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 RUNX3Q13761 415 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 KRT33BQ14525 404 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 PDGFRLQ15198 375 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 OR4C11Q6IEV9 310 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 TMEM17Q86X19 198 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 C17orf47Q8NEP4 570 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 OR5K2Q8NHB8 316 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 ACOT11Q8WXI4 607 aaPredicted RBP13.13□□□□□ -0.31
RER1-207ENST00000488353 KLK6Q92876 244 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 C16orf58Q96GQ5 468 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 PGLYRP3Q96LB9 341 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 UTP23Q9BRU9 249 aaKnown RBP13.13□□□□□ -0.31
RER1-207ENST00000488353 SEMA4GQ9NTN9 838 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
RER1-207ENST00000488353 PCDHGA9Q9Y5G4 932 aaKnown RBP13.13□□□□□ -0.31
RER1-207ENST00000488353 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 CPSF4LA6NMK7 179 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 PRAMEF2O60811 474 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 SERPINA3P01011 423 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 ANXA7P20073 488 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 PTNP21246 168 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 MAT2AP31153 395 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 CD96P40200 585 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 GPR4P46093 362 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 NRG3P56975 720 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 POLR2GP62487 172 aaKnown RBP eCLIP13.12□□□□□ -0.31
RER1-207ENST00000488353 DPTQ07507 201 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 FAM46CQ5VWP2 391 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 NIPAL3Q6P499 406 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 ZNF793Q6ZN11 406 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 CCDC116Q8IYX3 515 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 HDDC3Q8N4P3 179 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 LINC01555Q8NAE3 123 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 ASB12Q8WXK4 309 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 NSMAFQ92636 917 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 DIO2Q92813 273 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 AICDAQ9GZX7 198 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 ACSS1Q9NUB1 689 aaPredicted RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 MRTO4Q9UKD2 239 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 A0A1W2PPV9 198 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 KHDRBS3O75525 346 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 RASGRP1O95267 797 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 GCGRP47871 477 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 MEOX2P50222 304 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 RAB13P51153 203 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
RER1-207ENST00000488353 ERVK-25P63136 954 aa13.12□□□□□ -0.31
RER1-207ENST00000488353 MAT1AQ00266 395 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms