RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SLC9A6Q92581 669 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 MARC2Q969Z3 335 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 NXPE2Q96DL1 559 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 CNRIP1Q96F85 164 aaPredicted RBP12.64□□□□□ -0.39
COPS7B-221ENST00000488111 PEX11GQ96HA9 241 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 DPYSL5Q9BPU6 564 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
COPS7B-221ENST00000488111 POLDIP3Q9BY77 421 aaKnown RBP12.64□□□□□ -0.39
COPS7B-221ENST00000488111 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 HDHD2Q9H0R4 259 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 APMAPQ9HDC9 416 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 FGF20Q9NP95 211 aaPredicted RBP12.64□□□□□ -0.39
COPS7B-221ENST00000488111 SLC35C2Q9NQQ7 365 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 MRPS18AQ9NVS2 196 aaKnown RBP12.64□□□□□ -0.39
COPS7B-221ENST00000488111 RDH8Q9NYR8 311 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
COPS7B-221ENST00000488111 OR2W5A6NFC9 320 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 LANCL1O43813 399 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 PRKYO43930 277 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 LDB3O75112 727 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 TIAF1O95411 115 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 TP53P04637 393 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 PCBP4P57723 403 aaKnown RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF630Q2M218 657 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 SYT14P1Q58G82 188 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 TFAP2EQ6VUC0 442 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 LINC00518Q8N0U6 118 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 MS4A15Q8N5U1 240 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ARIH2OSQ8N7S6 290 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 OR5AK3PQ8NH89 298 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 APOBEC4Q8WW27 367 aaKnown RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 FGF11Q92914 225 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 LINC00052Q96N35 136 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF582Q96NG8 517 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 NDC1Q9BTX1 674 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 RNF32Q9H0A6 362 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 LYRM4Q9HD34 91 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ACSL6Q9UKU0 697 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 WDFY3Q8IZQ1 3526 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 H3BN98 237 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 CYR61O00622 381 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 TBX19O60806 448 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 NCR1O76036 304 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 NSA2O95478 260 aaKnown RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ARAFP10398 606 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ELAVL4P26378 380 aaKnown RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 SSTR2P30874 369 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 TLX1P31314 330 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ACY1Q03154 408 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 ZFP36L1Q07352 338 aaKnown RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-221ENST00000488111 BBS4Q96RK4 519 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 SLC35A5Q9BS91 424 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
COPS7B-221ENST00000488111 MUC6Q6W4X9 2439 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 EFCAB7A8K855 629 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 FAAHO00519 579 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 LRP3O75074 770 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 TFPIP10646 304 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ELK1P19419 428 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 SOAT1P35610 550 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 NCBP2P52298 156 aaKnown RBP eCLIP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 HSD17B12Q53GQ0 312 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 STPG1Q5TH74 334 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 DOK4Q8TEW6 326 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 RIT1Q92963 219 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 PTP4A1Q93096 173 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 COL26A1Q96A83 441 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 RFT1Q96AA3 541 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 OTUB1Q96FW1 271 aaPredicted RBP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ABCG5Q9H222 651 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 CXorf36Q9H7Y0 433 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 EXTL2Q9UBQ6 330 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 NUBP2Q9Y5Y2 271 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 CACNG2Q9Y698 323 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 SPACA6W5XKT8 324 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 MFSD2BA6NFX1 497 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 B4GALT2O60909 372 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 CCL4P13236 92 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 DNASE1P24855 282 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 RAB38P57729 211 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 PWWP2BQ6NUJ5 590 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 PGBD2Q6P3X8 592 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 TMEM91Q6ZNR0 172 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 OVCH2Q7RTZ1 564 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ZNF485Q8NCK3 441 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 OTULINQ96BN8 352 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 AMDHD1Q96NU7 426 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 ARHGAP9Q9BRR9 750 aa12.62□□□□□ -0.39
COPS7B-221ENST00000488111 THAP7Q9BT49 309 aaPredicted RBP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
COPS7B-221ENST00000488111 DLL4Q9NR61 685 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms