RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 ZNF836Q6ZNA1 936 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.04■□□□□ 0.16
CCDC12-205ENST00000488069 KRTAP1-3Q8IUG1 177 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 TMEM19Q96HH6 336 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 EBF4Q9BQW3 602 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 TMEM204Q9BSN7 226 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 CCDC28BQ9BUN5 200 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 PAIP1Q9H074 479 aaKnown RBP16.04■□□□□ 0.16
CCDC12-205ENST00000488069 ZNF232Q9UNY5 417 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 ZNF443Q9Y2A4 671 aaPredicted RBP16.04■□□□□ 0.16
CCDC12-205ENST00000488069 NOSIPQ9Y314 301 aaKnown RBP16.04■□□□□ 0.16
CCDC12-205ENST00000488069 PCDHB14Q9Y5E9 798 aa16.04■□□□□ 0.16
CCDC12-205ENST00000488069 A0A0G2JPF8 293 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 HNRNPCL2B2RXH8 293 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 HNRNPCL3B7ZW38 293 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 CLIC1O00299 241 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 EIF1BO60739 113 aaKnown RBP16.03■□□□□ 0.16
CCDC12-205ENST00000488069 HNRNPCL1O60812 293 aaKnown RBP16.03■□□□□ 0.16
CCDC12-205ENST00000488069 LYZL6O75951 148 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 PLAUP00749 431 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 THBS1P07996 1170 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 HNRNPCL4P0DMR1 293 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 EDNRAP25101 427 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 SLC16A1P53985 500 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 COPZ1P61923 177 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 SLC35A1P78382 337 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 FADDQ13158 208 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 CAPRIN1Q14444 709 aaKnown RBP16.03■□□□□ 0.16
CCDC12-205ENST00000488069 RGNQ15493 299 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 RPS26P11Q5JNZ5 115 aaPredicted RBP16.03■□□□□ 0.16
CCDC12-205ENST00000488069 Q5PR19 223 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 RNF220Q5VTB9 566 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 HDXQ7Z353 690 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 APH1AQ96BI3 265 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
CCDC12-205ENST00000488069 ESRP2Q9H6T0 727 aaKnown RBP16.03■□□□□ 0.16
CCDC12-205ENST00000488069 A0A096LPI6 279 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-205ENST00000488069 HS3ST1O14792 307 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 GKN3PP0CG01 181 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 COX5AP20674 150 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 CXCR1P25024 350 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 AQP5P55064 265 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 H3F3AP84243 136 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 STK11Q15831 433 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 BLOC1S3Q6QNY0 202 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 CCDC103Q8IW40 242 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 UBE2J2Q8N2K1 259 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 CADM2Q8N3J6 435 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 SPDL1Q96EA4 605 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 NAA11Q9BSU3 229 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-205ENST00000488069 ADAM19Q9H013 955 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 A4GALTQ9NPC4 353 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 INTS9Q9NV88 658 aaKnown RBP16.02■□□□□ 0.16
CCDC12-205ENST00000488069 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.16
CCDC12-205ENST00000488069 CCDC167Q9P0B6 97 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 IFT52Q9Y366 437 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 RNF115Q9Y4L5 304 aa16.02■□□□□ 0.16
CCDC12-205ENST00000488069 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
CCDC12-205ENST00000488069 NR5A2O00482 541 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 CD3EP07766 207 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 NUDT7P0C024 238 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 IMPDH2P12268 514 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 BMP2P12643 396 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 HOXB9P17482 250 aaPredicted RBP16.01■□□□□ 0.15
CCDC12-205ENST00000488069 GGT1P19440 569 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 IGHV1-2P23083 117 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 ACAA2P42765 397 aaKnown RBP16.01■□□□□ 0.15
CCDC12-205ENST00000488069 IRX1P78414 480 aaPredicted RBP16.01■□□□□ 0.15
CCDC12-205ENST00000488069 NCMAPQ5T1S8 102 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 WBP2NLQ6ICG8 309 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 SSX8Q7RTT4 187 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 FUNDC1Q8IVP5 155 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 ZNF611Q8N823 705 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 TMEM171Q8WVE6 324 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 MUCL1Q96DR8 90 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 PERPQ96FX8 193 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 SPATA9Q9BWV2 254 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 BCL2L10Q9HD36 194 aa16.01■□□□□ 0.15
CCDC12-205ENST00000488069 NIPBLQ6KC79 2804 aaeCLIP16■□□□□ 0.15
CCDC12-205ENST00000488069 C5orf58C9J3I9 102 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 CLOCKO15516 846 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 RAMP1O60894 148 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 MRPL33O75394 65 aaKnown RBP16■□□□□ 0.15
CCDC12-205ENST00000488069 IGHV3-9P01782 118 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 NCF2P19878 526 aaPredicted RBP16■□□□□ 0.15
CCDC12-205ENST00000488069 IDUAP35475 653 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 PPA1Q15181 289 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 ZNF311Q5JNZ3 666 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 TIMM23BQ5SRD1 257 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 LRIF1Q5T3J3 769 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 PAQR6Q6TCH4 344 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 PRSS57Q6UWY2 283 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 P2RY8Q86VZ1 359 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 CLIP4Q8N3C7 705 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 BBS10Q8TAM1 723 aa16■□□□□ 0.15
CCDC12-205ENST00000488069 AKAP1Q92667 903 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms