RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 GALNT5Q7Z7M9 940 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 MTDHQ86UE4 582 aaKnown RBP9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 VRK2Q86Y07 508 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 ZNF433Q8N7K0 673 aaPredicted RBP9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 PIGXQ8TBF5 258 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 TMEM171Q8WVE6 324 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 ARL8AQ96BM9 186 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 TRIM2Q9C040 744 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 NKIRAS1Q9NYS0 192 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 EMC3Q9P0I2 261 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 TMED7Q9Y3B3 224 aa9.9□□□□□ -0.82
RAB11FIP3-210ENST00000487899 DPRXA6NFQ7 191 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 OVOL3O00110 214 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PDLIM1O00151 329 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CLOCKO15516 846 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF208O43345 1280 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PGM3O95394 542 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 KRT75O95678 551 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 DBIP07108 87 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CD3EP07766 207 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 THBS1P07996 1170 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ITGA5P08648 1049 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GKN3PP0CG01 181 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 NR2F1P10589 423 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CCNA2P20248 432 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TACR3P29371 465 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ACAA2P42765 397 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLC1A3P43003 542 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MAGEA8P43361 318 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HTR3AP46098 478 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MRPL19P49406 292 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CLK1P49759 484 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ANXA11P50995 505 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 POLR2HP52434 150 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 FOXG1P55316 489 aaPredicted RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 DSTNP60981 165 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 LTBQ06643 244 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SPOCK1Q08629 439 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 STK11Q15831 433 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF672Q499Z4 452 aaPredicted RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TIMM23BQ5SRD1 257 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CLEC9AQ6UXN8 241 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLC38A5Q8WUX1 472 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HSD17B8Q92506 261 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 FBXW5Q969U6 566 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TMEM19Q96HH6 336 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 RSPO3Q9BXY4 272 aaPredicted RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PAIP1Q9H074 479 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CXorf56Q9H5V9 222 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ESRP2Q9H6T0 727 aaKnown RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TPT1P8Q9HAU6 139 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TMEM181Q9P2C4 612 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 LAMP3Q9UQV4 416 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF443Q9Y2A4 671 aaPredicted RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MAGED1Q9Y5V3 778 aaPredicted RBP9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 FLVCR1Q9Y5Y0 555 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 USH1CQ9Y6N9 552 aa9.89□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SONP18583 2426 aaKnown RBP9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CFAP73A6NFT4 308 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 OR5H1A6NKK0 313 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TMEM229AB2RXF0 380 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SHISA9B4DS77 424 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 FRS3O43559 492 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TMCC2O75069 709 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ERLIN1O75477 346 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 RAD51DO75771 328 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 LY6G6DO95868 133 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 NUDT7P0C024 238 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TFPTP0C1Z6 253 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 BMP2P12643 396 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PRG2P13727 222 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 IL7RP16871 459 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GGT1P19440 569 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 POLR2JP52435 117 aaKnown RBP9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CRISP3P54108 245 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 RPS4XP62701 263 aaKnown RBP9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLC25A3Q00325 362 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 KRTAP1-1Q07627 177 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PPA1Q15181 289 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PGGHGQ32M88 737 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 LIN52Q52LA3 116 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 C6orf10Q5SRN2 563 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 FBXW9Q5XUX1 488 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLC2A7Q6PXP3 512 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 EPGNQ6UW88 154 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CASP12Q6UXS9 341 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MSRB3Q8IXL7 192 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PEX5LQ8IYB4 626 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF100Q8IYN0 542 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 C10orf111Q8N326 155 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MIER2Q8N344 545 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PMM1Q92871 262 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 APH1AQ96BI3 265 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZHX1-C8orf76Q96EF9 292 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 C7orf26Q96N11 449 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 EBF4Q9BQW3 602 aa9.88□□□□□ -0.83
RAB11FIP3-210ENST00000487899 AMBRA1Q9C0C7 1298 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms