RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 Q6ZT83 130 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 GALNT5Q7Z7M9 940 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 WFDC8Q8IUA0 241 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 TGIF2LYQ8IUE0 185 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 C10orf111Q8N326 155 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 STON2Q8WXE9 905 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 KISS1RQ969F8 398 aaPredicted RBP10.15□□□□□ -0.78
SPEN-205ENST00000487496 DDIT4LQ96D03 193 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 SPATA9Q9BWV2 254 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 VAPAQ9P0L0 249 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 GMEB1Q9Y692 573 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 MED13LQ71F56 2210 aa10.15□□□□□ -0.78
SPEN-205ENST00000487496 FREM1Q5H8C1 2179 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 TRBV5-3A0A0A0MS03 114 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 A0A1W2PP18 115 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ZC3H12DA2A288 527 aaKnown RBP10.14□□□□□ -0.79
SPEN-205ENST00000487496 C5orf58C9J3I9 102 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 RAMP1O60894 148 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 PGM3O95394 542 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 IMPDH2P12268 514 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 PRG2P13727 222 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 NTF4P34130 210 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 SLC16A1P53985 500 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 NR1H2P55055 460 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 COPZ1P61923 177 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ADAM8P78325 824 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 SLC35A1P78382 337 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 TAB1Q15750 504 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ACKR1Q16570 336 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ZNF311Q5JNZ3 666 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 GCNT6Q5T4J0 391 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 WBP2NLQ6ICG8 309 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ALKBH2Q6NS38 261 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.14□□□□□ -0.79
SPEN-205ENST00000487496 CCDC103Q8IW40 242 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ZNF100Q8IYN0 542 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 CADM2Q8N3J6 435 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 PIGXQ8TBF5 258 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 PLPPR2Q96GM1 343 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 RABEP2Q9H5N1 569 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 IKZF5Q9H5V7 419 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ARMC7Q9H6L4 198 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 UBTD1Q9HAC8 227 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 CACYBPQ9HB71 228 aaKnown RBP10.14□□□□□ -0.79
SPEN-205ENST00000487496 BEX4Q9NWD9 120 aaPredicted RBP10.14□□□□□ -0.79
SPEN-205ENST00000487496 EMC3Q9P0I2 261 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 IFT52Q9Y366 437 aa10.14□□□□□ -0.79
SPEN-205ENST00000487496 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 GPR171O14626 319 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 EIF1BO60739 113 aaKnown RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 EDF1O60869 148 aaKnown RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 LYZL6O75951 148 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 CNOT4O95628 575 aaKnown RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 PLAUP00749 431 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 ARAFP10398 606 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 CD99P14209 185 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 ETS2P15036 469 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 GPX2P18283 190 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 FPR1P21462 350 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 PPIBP23284 216 aaKnown RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 CXCR1P25024 350 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 DLEU7Q6UYE1 221 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 BHLHA15Q7RTS1 189 aaPredicted RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 SERPINA11Q86U17 422 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 NFKBIDQ8NI38 313 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 BBS10Q8TAM1 723 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 HSD17B8Q92506 261 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 PIGTQ969N2 578 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 USB1Q9BQ65 265 aaKnown RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 SIKE1Q9BRV8 207 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 NAA11Q9BSU3 229 aaPredicted RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 RSPO3Q9BXY4 272 aaPredicted RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 POTEKPQ9BYX7 375 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 ZNF385DQ9H6B1 395 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 NPHS2Q9NP85 383 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 TRIM33Q9UPN9 1127 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 NOSIPQ9Y314 301 aaKnown RBP10.13□□□□□ -0.79
SPEN-205ENST00000487496 PRR14LQ5THK1 2151 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 CELSR1Q9NYQ6 3014 aa10.13□□□□□ -0.79
SPEN-205ENST00000487496 LIPT2A6NK58 231 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 EVPLLA8MZ36 301 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 FRS3O43559 492 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 IGHV3-9P01782 118 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 COX5AP20674 150 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 IGHV1-2P23083 117 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 HOXC12P31275 282 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 PRKAR1BP31321 381 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 IDUAP35475 653 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 HOXC5Q00444 222 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 CDK6Q00534 326 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 FOXD4Q12950 439 aaPredicted RBP10.12□□□□□ -0.79
SPEN-205ENST00000487496 BNIP2Q12982 314 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 CEACAM7Q14002 265 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 RUNDC3AQ59EK9 446 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 FBXW9Q5XUX1 488 aa10.12□□□□□ -0.79
SPEN-205ENST00000487496 REEP3Q6NUK4 255 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms