RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ZHX1-C8orf76Q96EF9 292 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 MUS81Q96NY9 551 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 TRNT1Q96Q11 434 aaKnown RBP10.74□□□□□ -0.69
VPS16-208ENST00000487461 PARD6BQ9BYG5 372 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 SLC38A1Q9H2H9 487 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 ALG2Q9H553 416 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 KCNK9Q9NPC2 374 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 ASB6Q9NWX5 421 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 TMEM181Q9P2C4 612 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 OSGIN1Q9UJX0 560 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 TRAPPC4Q9Y296 219 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 B3GALT5Q9Y2C3 310 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 SLC25A15Q9Y619 301 aa10.74□□□□□ -0.69
VPS16-208ENST00000487461 TMED7-TICAM2A0A0A6YYA0 188 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 AGAP5A6NIR3 686 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 SDHDO14521 159 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 GPR171O14626 319 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 DNPH1O43598 174 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 MRPL33O75394 65 aaKnown RBP10.73□□□□□ -0.69
VPS16-208ENST00000487461 GSNP06396 782 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 IMPDH2P12268 514 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 MAGEA8P43361 318 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 HTR3AP46098 478 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 DMTNQ08495 405 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 BST1Q10588 318 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 GABRA6Q16445 453 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 COX20Q5RI15 118 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 OGFOD2Q6N063 350 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 LRRC74BQ6ZQY2 392 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 ZNF621Q6ZSS3 439 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 CMIPQ8IY22 773 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 PIAS4Q8N2W9 510 aaPredicted RBP10.73□□□□□ -0.69
VPS16-208ENST00000487461 WDR31Q8NA23 367 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 OR52E4Q8NGH9 312 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 RADILQ96JH8 1075 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 C1QTNF6Q9BXI9 259 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 MTHFD2LQ9H903 347 aaPredicted RBP10.73□□□□□ -0.69
VPS16-208ENST00000487461 AIG1Q9NVV5 245 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 TMED7Q9Y3B3 224 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 GPR45Q9Y5Y3 372 aa10.73□□□□□ -0.69
VPS16-208ENST00000487461 RTTNQ86VV8 2226 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 PLCE1Q9P212 2302 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 ZC3H12DA2A288 527 aaKnown RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 PDLIM1O00151 329 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 ZNF208O43345 1280 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 SSX4O60224 188 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 PGRP06401 933 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 ITGA5P08648 1049 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 PTAFRP25105 342 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 CD40P25942 277 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 TACR3P29371 465 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 TTKP33981 857 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 SLC1A3P43003 542 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 POLR2HP52434 150 aaKnown RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 SLC35A1P78382 337 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 IRX1P78414 480 aaPredicted RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 HPCAP84074 193 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 SPOCK1Q08629 439 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 MAPK11Q15759 364 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 AGAP6Q5VW22 663 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 SLC22A25Q6T423 547 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 TMEM108Q6UXF1 575 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 SPATA19Q7Z5L4 167 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 KIRREL3Q8IZU9 778 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 PNPT1Q8TCS8 783 aaKnown RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 PMM1Q92871 262 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 HS6ST2Q96MM7 605 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 OR52E6Q96RD3 313 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 PANX1Q96RD7 426 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 DHRS9Q9BPW9 319 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 PAIP2Q9BPZ3 127 aaKnown RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 ADAM19Q9H013 955 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 CENPHQ9H3R5 247 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 WDR55Q9H6Y2 383 aaPredicted RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 BARX1Q9HBU1 254 aaPredicted RBP10.72□□□□□ -0.69
VPS16-208ENST00000487461 FAIMQ9NVQ4 179 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 TAS2R16Q9NYV7 291 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 MALT1Q9UDY8 824 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 MGAT4BQ9UQ53 548 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 FLVCR1Q9Y5Y0 555 aa10.72□□□□□ -0.69
VPS16-208ENST00000487461 CFAP73A6NFT4 308 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 M0R1B8 84 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 FAAHO00519 579 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 EIF1BO60739 113 aaKnown RBP10.71□□□□□ -0.69
VPS16-208ENST00000487461 NR2F1P10589 423 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 IL7RP16871 459 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 RPS4Y1P22090 263 aaKnown RBP10.71□□□□□ -0.69
VPS16-208ENST00000487461 EPHA3P29320 983 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 WDR4P57081 412 aaKnown RBP10.71□□□□□ -0.69
VPS16-208ENST00000487461 EPS8Q12929 822 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 SLC17A1Q14916 467 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 CEP85LQ5SZL2 805 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 MRPL2Q5T653 305 aaKnown RBP10.71□□□□□ -0.69
VPS16-208ENST00000487461 C9orf135Q5VTT2 229 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 OR7E24Q6IFN5 339 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 C11orf71Q6IPW1 123 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 KLHL17Q6TDP4 642 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 B3GLCTQ6Y288 498 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 TRIML2Q8N7C3 387 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 ZIC4Q8N9L1 334 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms