RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 KLHL21Q9UJP4 597 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 POMPQ9Y244 141 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 VDAC3Q9Y277 283 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 CORINQ9Y5Q5 1042 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 A0A087WZY1 265 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 A0A1B0GUS0 222 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 J3QLI3 93 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 UBXN8O00124 270 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 WNT9BO14905 357 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 RGS14O43566 566 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 PRB2P02812 416 aaPredicted RBP10.1□□□□□ -0.79
TRIM56-204ENST00000487252 PCNAP12004 261 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 PCSK2P16519 638 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 SHC1P29353 583 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 KRT20P35900 424 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 MAPRE2Q15555 327 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 TSNQ15631 228 aaKnown RBP10.1□□□□□ -0.79
TRIM56-204ENST00000487252 CPTPQ5TA50 214 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 NXNQ6DKJ4 435 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 RBMS3Q6XE24 437 aaKnown RBP10.1□□□□□ -0.79
TRIM56-204ENST00000487252 ADAMTSL2Q86TH1 951 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 SLC43A2Q8N370 569 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 TCAIMQ8N3R3 496 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM56-204ENST00000487252 ZNF483Q8TF39 744 aaPredicted RBP10.1□□□□□ -0.79
TRIM56-204ENST00000487252 DNAJC9Q8WXX5 260 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 ESAMQ96AP7 390 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 TMIGD2Q96BF3 282 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 RCN3Q96D15 328 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 PHF21BQ96EK2 531 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 C1QTNF6Q9BXI9 259 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 TMEM185BQ9H7F4 350 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 EFCAB1Q9HAE3 211 aa10.1□□□□□ -0.79
TRIM56-204ENST00000487252 DYNC2H1Q8NCM8 4307 aaKnown RBP10.1□□□□□ -0.79
TRIM56-204ENST00000487252 A0A0G2JMP0 313 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 A0A0X1KG70 313 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 SYCE1LA8MT33 242 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 G3V4G9 280 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 AIM2O14862 343 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 UBDO15205 165 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 NME6O75414 186 aaPredicted RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 STK16O75716 305 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 SUPT7LO94864 414 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 KNG1P01042 644 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 PTX3P26022 381 aaPredicted RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 HSPA7P48741 367 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 NUDT2P50583 147 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 LOXL3P58215 753 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 MRPS35P82673 323 aaKnown RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 COL10A1Q03692 680 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 ZP4Q12836 540 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 CSTF3Q12996 717 aaKnown RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 GABRA6Q16445 453 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 PLPPR5Q32ZL2 321 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 FBXO48Q5FWF7 155 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 CDKL4Q5MAI5 379 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 C1QTNF12Q5T7M4 302 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 C8orf82Q6P1X6 216 aaPredicted RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 HACD2Q6Y1H2 254 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 RPS27LQ71UM5 84 aaKnown RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 MARCH3Q86UD3 253 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 CARM1Q86X55 608 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
TRIM56-204ENST00000487252 OR4M2Q8NGB6 313 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 POC1BQ8TC44 478 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 SLC25A28Q96A46 364 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 PPP1R36Q96LQ0 422 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 RNF145Q96MT1 663 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 SERPINI1Q99574 410 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 TIGARQ9NQ88 270 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 BATF3Q9NR55 127 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 TREM2Q9NZC2 230 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 OPN4Q9UHM6 478 aa10.09□□□□□ -0.79
TRIM56-204ENST00000487252 SACSQ9NZJ4 4579 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 NCF1BA6NI72 391 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 SLC22A31A6NKX4 558 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF724A8MTY0 619 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 NCF1CA8MVU1 366 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 H3BNX3 289 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 CASQ2O14958 399 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 AZIN1O14977 448 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 IL33O95760 270 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 TSPAN15O95858 294 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 GBAP04062 536 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 OR4A8P0C604 315 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 SAGP10523 405 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 NCF1P14598 390 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 CSNK2A2P19784 350 aaPredicted RBP10.08□□□□□ -0.8
TRIM56-204ENST00000487252 ENPP1P22413 925 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 PRR5P85299 388 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 PSG6Q00889 435 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 LCP2Q13094 533 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 CEACAM7Q14002 265 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 LTB4RQ15722 352 aa10.08□□□□□ -0.8
TRIM56-204ENST00000487252 PFKFB4Q16877 469 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms