RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 C16orf58Q96GQ5 468 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 METTL2AQ96IZ6 378 aaKnown RBP6.62□□□□□ -1.35
PDPN-205ENST00000487038 TMEM237Q96Q45 408 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 THUMPD3Q9BV44 507 aaKnown RBP6.62□□□□□ -1.35
PDPN-205ENST00000487038 ZNF416Q9BWM5 594 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 ACTRT3Q9BYD9 372 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 MS4A5Q9H3V2 200 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 UNKLQ9H9P5 680 aaKnown RBP6.62□□□□□ -1.35
PDPN-205ENST00000487038 GRHL1Q9NZI5 618 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 SH3BP4Q9P0V3 963 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 FAF1Q9UNN5 650 aaPredicted RBP6.62□□□□□ -1.35
PDPN-205ENST00000487038 UTP11Q9Y3A2 253 aaKnown RBP6.62□□□□□ -1.35
PDPN-205ENST00000487038 PPIAL4AQ9Y536 164 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 TIMM22Q9Y584 194 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 CORINQ9Y5Q5 1042 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 WNK2Q9Y3S1 2297 aa6.62□□□□□ -1.35
PDPN-205ENST00000487038 ARPC4-TTLL3A0A0A6YYG9 625 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 OR6C65A6NJZ3 312 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 M0R233 179 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 PIP5K1BO14986 540 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 TBX19O60806 448 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CSTAP01040 98 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ADRA2AP08913 450 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CECR9P0C854 216 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ARAFP10398 606 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 GATA3P23771 443 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 THBS4P35443 961 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 FRKP42685 505 aaPredicted RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 OR2B6P58173 313 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 SLC35A1P78382 337 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 SKP2Q13309 424 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 SNTB2Q13425 540 aaKnown RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 TP53BP2Q13625 1128 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 UNC50Q53HI1 259 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 EXOSC6Q5RKV6 272 aaKnown RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 OTUD3Q5T2D3 398 aaPredicted RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 PDZK1Q5T2W1 519 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 DCAF12L2Q5VW00 463 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ANKRD26P1Q6NSI1 321 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ACSM5Q6NUN0 579 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ANKRD16Q6P6B7 361 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 GRINAQ7Z429 371 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 TREML1Q86YW5 311 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CREG2Q8IUH2 290 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CCDC103Q8IW40 242 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 GSPT2Q8IYD1 628 aaKnown RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 ZCCHC24Q8N2G6 241 aaKnown RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 FAM169BQ8N8A8 192 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 OR56A1Q8NGH5 318 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 OR1K1Q8NGR3 316 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 FBXO25Q8TCJ0 367 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 RDH5Q92781 318 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 MOAP1Q96BY2 351 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 FAM120BQ96EK7 910 aaKnown RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 KCNA7Q96RP8 456 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 DOK1Q99704 481 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CCT7Q99832 543 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 LAT2Q9GZY6 243 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 SLITRK2Q9H156 845 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 REEP4Q9H6H4 257 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 MID1IP1Q9NPA3 183 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ESM1Q9NQ30 184 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 ACER3Q9NUN7 267 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 OXSMQ9NWU1 459 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 TMEM181Q9P2C4 612 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CRNNQ9UBG3 495 aaPredicted RBP6.61□□□□□ -1.35
PDPN-205ENST00000487038 PCDHGB4Q9UN71 923 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 TRAPPC4Q9Y296 219 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 CMAHPQ9Y471 501 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 SAR1BQ9Y6B6 198 aa6.61□□□□□ -1.35
PDPN-205ENST00000487038 RYR3Q15413 4870 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ESPNB1AK53 854 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 NPIPB9F8W1W9 429 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 LYNX1G3V0Z9 82 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PPIHO43447 177 aaKnown RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 SYNGR3O43761 229 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 DNAJA2O60884 412 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 SEC22BO75396 215 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ALX3O95076 343 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PRSS23O95084 383 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 MPZL1O95297 269 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 AK1P00568 194 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 IGKV3-15P01624 115 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 IGLV1-44P01699 117 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 GSTA1P08263 222 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 UBTFL6P0CB48 400 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 LYNX1P0DP58 116 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 HOXB1P14653 301 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 IMPDH1P20839 514 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PRPH2P23942 346 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 PRTN3P24158 256 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 ZFP36P26651 326 aaKnown RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 CALCRP30988 508 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 NTF4P34130 210 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 RPL3P39023 403 aaKnown RBP6.6□□□□□ -1.35
PDPN-205ENST00000487038 HTR3AP46098 478 aa6.6□□□□□ -1.35
PDPN-205ENST00000487038 EVX1P49640 407 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms