RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 E7ENQ6 273 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 ZNF264O43296 627 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 UGT1A9O60656 530 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 B4GALT2O60909 372 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 PALMO75781 387 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 LY6G6DO95868 133 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 IGHG4P01861 327 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 CAPN1P07384 714 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 CALCRP30988 508 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 RFC4P35249 363 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 EPS15P42566 896 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 MAGEA8P43361 318 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 TNFRSF17Q02223 184 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 IMMTQ16891 758 aaKnown RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 KLHL38Q2WGJ6 581 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 EOGTQ5NDL2 527 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 SAMD4BQ5PRF9 694 aaKnown RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 PDZK1Q5T2W1 519 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 HSDL2Q6YN16 418 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 NBPF5PQ86XG9 351 aaPredicted RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 VRK2Q86Y07 508 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 TMEM252Q8N6L7 170 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 ALLCQ8N6M5 410 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 OR2AP1Q8NGE2 309 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 OR13C2Q8NGS9 318 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 N4BP2L2Q92802 583 aaPredicted RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 MARC2Q969Z3 335 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 CXorf40BQ96DE9 158 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 SLC38A2Q96QD8 506 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 CCNL2Q96S94 520 aaPredicted RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 MYCBPQ99417 103 aaPredicted RBP3.31□□□□□ -1.88
SMC4-218ENST00000486711 RNF126Q9BV68 326 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 SLITRK2Q9H156 845 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 FN3KRPQ9HA64 309 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 SGK2Q9HBY8 427 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 MCCC2Q9HCC0 563 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 MARCH5Q9NX47 278 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 TMEM9Q9P0T7 183 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 B4GALT7Q9UBV7 327 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 SEC14L3Q9UDX4 400 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 BTNL2Q9UIR0 455 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 ADAM28Q9UKQ2 775 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 PIGLQ9Y2B2 252 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 IFT52Q9Y366 437 aa3.31□□□□□ -1.88
SMC4-218ENST00000486711 IQANK1A0A1B0GTG1 560 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 FAM240BA0A1B0GVZ2 78 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 A8MXQ7 604 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 KLLNB2CW77 178 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 K7N7A8 449 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 LYPD3O95274 346 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 CLDN9O95484 217 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 AQP1P29972 269 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 CCR1P32246 355 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 BTDP43251 543 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 BIDP55957 195 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 KLRB1Q12918 225 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 DDX39BQ13838 428 aaKnown RBP3.3□□□□□ -1.88
SMC4-218ENST00000486711 SLC15A2Q16348 729 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 DMRTC1Q5HYR2 192 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 RUFY3Q7L099 469 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 TGIF2LXQ8IUE1 241 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 ZNF584Q8IVC4 421 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 C11orf53Q8IXP5 236 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 PRR22Q8IZ63 422 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 OR2L13Q8N349 312 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 FTMTQ8N4E7 242 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 TRPV1Q8NER1 839 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 BBS1Q8NFJ9 593 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 SCFD1Q8WVM8 642 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 UBE2E3Q969T4 207 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 C10orf35Q96D05 121 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 TIMD4Q96H15 378 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 KLHDC3Q9BQ90 382 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 EBF4Q9BQW3 602 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 GON7Q9BXV9 100 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 RBKSQ9H477 322 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 REEP4Q9H6H4 257 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 VCPKMTQ9H867 229 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 TREM2Q9NZC2 230 aa3.3□□□□□ -1.88
SMC4-218ENST00000486711 RPL36Q9Y3U8 105 aaKnown RBP3.3□□□□□ -1.88
SMC4-218ENST00000486711 ATRXP46100 2492 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 SH3TC1Q8TE82 1336 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 SNTNA6NMZ2 147 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 HDAC3O15379 428 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 PRKAB2O43741 272 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 TIMM8AO60220 97 aaPredicted RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 RAMP3O60896 148 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 SNAPINO95295 136 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 TSPAN12O95859 305 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 RBMY1CP0DJD4 496 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 NCK1P16333 377 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 NCF2P19878 526 aaPredicted RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 GABRR1P24046 479 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 ATP1B3P54709 279 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 RIPPLY3P57055 190 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 TIMM10P62072 90 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 EGFEM1PQ0D2K5 195 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 PHYHD1Q5SRE7 291 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 C9orf129Q5T035 196 aaKnown RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 C1orf220Q5T0J3 134 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms