RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZNF311Q5JNZ3 666 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 SERPINA11Q86U17 422 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 RETREG3Q86VR2 466 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 NFKBIDQ8NI38 313 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 PIK3IP1Q96FE7 263 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 ACTR6Q9GZN1 396 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 TMEM181Q9P2C4 612 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 LEF1Q9UJU2 399 aaPredicted RBP17.35■□□□□ 0.37
SNX5-213ENST00000486039 TRIM33Q9UPN9 1127 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 TRAPPC4Q9Y296 219 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 NDUFAF1Q9Y375 327 aa17.35■□□□□ 0.37
SNX5-213ENST00000486039 NF1P21359 2839 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 IGKV3D-15A0A087WSY6 115 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 ZNF716A6NP11 495 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 C5orf58C9J3I9 102 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 RAMP1O60894 148 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 ETS2P15036 469 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 PPP3CBP16298 524 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 OR3A2P47893 321 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 OR2B6P58173 313 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 CDK6Q00534 326 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 PDK3Q15120 406 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 TSC22D1Q15714 1073 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 RUNDC3AQ59EK9 446 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 WBP2NLQ6ICG8 309 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.34■□□□□ 0.37
SNX5-213ENST00000486039 CCDC103Q8IW40 242 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 CADM2Q8N3J6 435 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 DDIT4LQ96D03 193 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 MBD6Q96DN6 1003 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 ALPK1Q96QP1 1244 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 CPPED1Q9BRF8 314 aaPredicted RBP17.34■□□□□ 0.37
SNX5-213ENST00000486039 TMEM120AQ9BXJ8 343 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 OR10A4Q9H209 315 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.34■□□□□ 0.37
SNX5-213ENST00000486039 PRSS50Q9UI38 385 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
SNX5-213ENST00000486039 ABCA4P78363 2273 aa17.33■□□□□ 0.37
SNX5-213ENST00000486039 KLF4O43474 513 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 FRS3O43559 492 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 DNPH1O43598 174 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 ATE1O95260 518 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 ADAP00813 363 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 RAF1P04049 648 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 MAP2K6P52564 334 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 H3F3AP84243 136 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 ADRM1Q16186 407 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 SFRP5Q5T4F7 317 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 METTL21CQ5VZV1 264 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 CGB2Q6NT52 195 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 GALNT5Q7Z7M9 940 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 DPP10Q8N608 796 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 ZHX1-C8orf76Q96EF9 292 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 HS3ST6Q96QI5 342 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 TMEM38AQ9H6F2 299 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 ARMC7Q9H6L4 198 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 CACYBPQ9HB71 228 aaKnown RBP17.33■□□□□ 0.36
SNX5-213ENST00000486039 FGFR1OP2Q9NVK5 253 aa17.33■□□□□ 0.36
SNX5-213ENST00000486039 ZNF469Q96JG9 3925 aaPredicted RBP17.32■□□□□ 0.36
SNX5-213ENST00000486039 EVPLLA8MZ36 301 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 FPR1P21462 350 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 CXCR1P25024 350 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 NTF4P34130 210 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 COPZ1P61923 177 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 HOXC5Q00444 222 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 BNIP2Q12982 314 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 REEP3Q6NUK4 255 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 DHDDSQ86SQ9 333 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 COMTD1Q86VU5 262 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 TSPEARQ8WU66 669 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 S100PBPQ96BU1 408 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 HDHD5Q9BXW7 423 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 POTEKPQ9BYX7 375 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 CORO2BQ9UQ03 480 aa17.32■□□□□ 0.36
SNX5-213ENST00000486039 MAP1AP78559 2803 aaPredicted RBP17.32■□□□□ 0.36
SNX5-213ENST00000486039 ANGPT2O15123 496 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 TPST1O60507 370 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 PRKAR1BP31321 381 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 SLC16A1P53985 500 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 SLC35A1P78382 337 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 SF3A3Q12874 501 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNX5-213ENST00000486039 SCARB2Q14108 478 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 KEAP1Q14145 624 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 SELPLGQ14242 412 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 Q6ZT83 130 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 STEAP2Q8NFT2 490 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 PIGXQ8TBF5 258 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 SLC35B4Q969S0 331 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 C3orf49Q96BT1 292 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 ANKRD27Q96NW4 1050 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 CGREF1Q99674 301 aa17.31■□□□□ 0.36
SNX5-213ENST00000486039 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.3■□□□□ 0.36
SNX5-213ENST00000486039 EIF1BO60739 113 aaKnown RBP17.3■□□□□ 0.36
SNX5-213ENST00000486039 TROVE2P10155 538 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX5-213ENST00000486039 CD53P19397 219 aa17.3■□□□□ 0.36
SNX5-213ENST00000486039 SLC6A2P23975 617 aa17.3■□□□□ 0.36
SNX5-213ENST00000486039 MTPNP58546 118 aa17.3■□□□□ 0.36
SNX5-213ENST00000486039 GUCY1A3Q02108 690 aa17.3■□□□□ 0.36
SNX5-213ENST00000486039 FOXD4Q12950 439 aaPredicted RBP17.3■□□□□ 0.36
SNX5-213ENST00000486039 ITGADQ13349 1161 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms