RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RFWD2Q8NHY2 731 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 PIGXQ8TBF5 258 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 MIPOL1Q8TD10 442 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 ZHX1-C8orf76Q96EF9 292 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 C7orf26Q96N11 449 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 CCDC106Q9BWC9 280 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 ZNF350Q9GZX5 532 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 SHARPINQ9H0F6 387 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 QRSL1Q9H0R6 528 aaKnown RBP11.43□□□□□ -0.58
HDAC6-227ENST00000485102 C12orf65Q9H3J6 166 aaKnown RBP11.43□□□□□ -0.58
HDAC6-227ENST00000485102 DCTN4Q9UJW0 460 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 POU2F3Q9UKI9 436 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 TRAPPC4Q9Y296 219 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 PMF1-BGLAPU3KQ54 211 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 CCT8L1PA6NM43 557 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 VWC2LB2RUY7 222 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 NDUFS8O00217 210 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 PIP5K1BO14986 540 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 FCMRO60667 390 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 SNNO75324 88 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-227ENST00000485102 MRPL33O75394 65 aaKnown RBP11.42□□□□□ -0.58
HDAC6-227ENST00000485102 CSTAP01040 98 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 C8BP07358 591 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 ITGA5P08648 1049 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 PGM1P36871 562 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 GZMKP49863 264 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 RNF144AP50876 292 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-227ENST00000485102 ZNF83P51522 516 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 CCR4P51679 360 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 HBA1P69905 142 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC6-227ENST00000485102 BST1Q10588 318 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 MERTKQ12866 999 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 PTGR1Q14914 329 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 SPDYE7PQ495Y7 208 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 C6orf136Q5SQH8 315 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 DDIASQ8IXT1 998 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 UBE2J2Q8N2K1 259 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 TMCO5AQ8N6Q1 288 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 WDR31Q8NA23 367 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 CKAP2Q8WWK9 683 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 SAP130Q9H0E3 1048 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 FKRPQ9H9S5 495 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 POLE3Q9NRF9 147 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 CHRNA9Q9UGM1 479 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 FIS1Q9Y3D6 152 aa11.42□□□□□ -0.58
HDAC6-227ENST00000485102 HDAC3O15379 428 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 PEX11AO75192 247 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 AGR2O95994 175 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 IGHV3-9P01782 118 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 CHRNGP07510 517 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 MATN1P21941 496 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 PAX7P23759 505 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 MAP2K6P52564 334 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 CHRNEQ04844 493 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 SPOCK1Q08629 439 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 GPR68Q15743 365 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 SWI5Q1ZZU3 235 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 ATP6AP1LQ52LC2 224 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 ZCCHC23Q6ZST2 131 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 GRINAQ7Z429 371 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 C6orf120Q7Z4R8 191 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 OR5D16Q8NGK9 328 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 STON2Q8WXE9 905 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 ARL5BQ96KC2 179 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 DUSP26Q9BV47 211 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 SERHL2Q9H4I8 314 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 CCDC134Q9H6E4 229 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 EXOSC3Q9NQT5 275 aaKnown RBP11.41□□□□□ -0.58
HDAC6-227ENST00000485102 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 PRDM4Q9UKN5 801 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 AMDHD2Q9Y303 409 aa11.41□□□□□ -0.58
HDAC6-227ENST00000485102 TMEM233B4DJY2 109 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 KIAA0513O60268 411 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 EIF1BO60739 113 aaKnown RBP11.4□□□□□ -0.58
HDAC6-227ENST00000485102 UBTFL6P0CB48 400 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-227ENST00000485102 SRD5A1P18405 259 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 MAGEA8P43361 318 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 FOXG1P55316 489 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-227ENST00000485102 CLDN8P56748 225 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 PHC1P78364 1004 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 TGFBR3Q03167 851 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 MAPK14Q16539 360 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 IL23RQ5VWK5 629 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 ADGRG3Q86Y34 549 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 KRTCAP2Q8N6L1 136 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 C3orf30Q96M34 536 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 C19orf24Q9BVV8 132 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 NSRP1Q9H0G5 558 aaKnown RBP11.4□□□□□ -0.58
HDAC6-227ENST00000485102 SLC17A5Q9NRA2 495 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 CTPS2Q9NRF8 586 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 EXD2Q9NVH0 621 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 TMEM181Q9P2C4 612 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 GIMAP2Q9UG22 337 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 MKLN1Q9UL63 735 aa11.4□□□□□ -0.58
HDAC6-227ENST00000485102 CENPVL1A0A0U1RR11 272 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 M0R1B8 84 aa11.39□□□□□ -0.59
HDAC6-227ENST00000485102 RNASET2O00584 256 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms