RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 JSRP1Q96MG2 331 aaPredicted RBP9.2□□□□□ -0.94
USP39-215ENST00000481409 GNRHR2Q96P88 292 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 BARD1Q99728 777 aaKnown RBP9.2□□□□□ -0.94
USP39-215ENST00000481409 NIPSNAP1Q9BPW8 284 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 ADI1Q9BV57 179 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 TTTY12Q9BZ98 90 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 GRIP2Q9C0E4 1043 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 ZNF703Q9H7S9 590 aaPredicted RBP9.2□□□□□ -0.94
USP39-215ENST00000481409 MEPEQ9NQ76 525 aaPredicted RBP9.2□□□□□ -0.94
USP39-215ENST00000481409 DEPPQ9NTK1 212 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 IL20Q9NYY1 176 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 PLA2G3Q9NZ20 509 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 BAIAP2Q9UQB8 552 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 VDAC3Q9Y277 283 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 TRAPPC4Q9Y296 219 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 MAGED1Q9Y5V3 778 aaPredicted RBP9.2□□□□□ -0.94
USP39-215ENST00000481409 AP4B1Q9Y6B7 739 aa9.2□□□□□ -0.94
USP39-215ENST00000481409 EML6Q6ZMW3 1958 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 DCHS1Q96JQ0 3298 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 IGKV1D-42A0A075B6H8 117 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 TMEM72A0PK05 275 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 UNC119BA6NIH7 251 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ENO4A6NNW6 628 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 EFCAB9A8MZ26 197 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 E9PQ18 207 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 DLGAP1O14490 977 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ZIC3O60481 467 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 MPZL2O60487 215 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 OR7A10O76100 309 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 HIST1H2ABP04908 130 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 C1QTNF9P0C862 333 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 SAGP10523 405 aaPredicted RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 BMP7P18075 431 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 GDF1P27539 372 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 CRISP1P54107 249 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ADARB1P78563 741 aaKnown RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 FOXK2Q01167 660 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 PLGLB1Q02325 96 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 EGR4Q05215 589 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 RAPSNQ13702 412 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ZNF169Q14929 603 aaPredicted RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 BCL2A1Q16548 175 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ZNF74Q16587 644 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 TBR1Q16650 682 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ZBED5Q49AG3 693 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 SYT14P1Q58G82 188 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 PDSS1Q5T2R2 415 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 C1orf140Q5VVS0 124 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ASB18Q6ZVZ8 466 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 HIST3H2AQ7L7L0 130 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 MAMDC2Q7Z304 686 aaPredicted RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 OAFQ86UD1 273 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 DEPDC4Q8N2C3 294 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 SCAIQ8N9R8 606 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ADPRHL1Q8NDY3 354 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 OR52L1Q8NGH7 329 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 OR14L1PQ8NHC6 308 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 POC1BQ8TC44 478 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 TRUB1Q8WWH5 349 aaKnown RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 HIST1H2ACQ93077 130 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 GTPBP3Q969Y2 492 aaKnown RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 PITX2Q99697 317 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 APOL4Q9BPW4 351 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 TACO1Q9BSH4 297 aaKnown RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 TAPBPLQ9BX59 468 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 ANKRD60Q9BZ19 345 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 TOR3AQ9H497 397 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 NANSQ9NR45 359 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 FAM118AQ9NWS6 357 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 PAQR5Q9NXK6 330 aaPredicted RBP9.19□□□□□ -0.94
USP39-215ENST00000481409 REV1Q9UBZ9 1251 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 CDH10Q9Y6N8 788 aa9.19□□□□□ -0.94
USP39-215ENST00000481409 LOC100130705A0A1B0GUX0 176 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 B4DXG7 233 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 M0R3G1 203 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 SEC14L5O43304 696 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 IDH3BO43837 385 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 URB1O60287 2271 aaKnown RBP9.18□□□□□ -0.94
USP39-215ENST00000481409 EIF1BO60739 113 aaKnown RBP9.18□□□□□ -0.94
USP39-215ENST00000481409 SNAP29O95721 258 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 PMS2P2O95744 297 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 ACTL6AO96019 429 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 CRYABP02511 175 aaKnown RBP9.18□□□□□ -0.94
USP39-215ENST00000481409 TSPAN19P0C672 248 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 ASAH2BP0C7U1 165 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 PEPDP12955 493 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 APEHP13798 732 aaKnown RBP9.18□□□□□ -0.94
USP39-215ENST00000481409 FUT1P19526 365 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 IDUAP35475 653 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 SMSP52788 366 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 GPR85P60893 370 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 CSNK2A1P68400 391 aaPredicted RBP9.18□□□□□ -0.94
USP39-215ENST00000481409 TEKQ02763 1124 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 KCNAB2Q13303 367 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 MED21Q13503 144 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 SLC10A1Q14973 349 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 LAPTM4AQ15012 233 aa9.18□□□□□ -0.94
USP39-215ENST00000481409 INPP5JQ15735 1006 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms