RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 P2RY8Q86VZ1 359 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 CCDC103Q8IW40 242 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 WDR60Q8WVS4 1066 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 HS6ST2Q96MM7 605 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 TRNT1Q96Q11 434 aaKnown RBP13.45□□□□□ -0.26
LIMS3-203ENST00000480744 ZBTB18Q99592 522 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 SLCO5A1Q9H2Y9 848 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 FAIMQ9NVQ4 179 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 TMEM181Q9P2C4 612 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 TMED7Q9Y3B3 224 aa13.45□□□□□ -0.26
LIMS3-203ENST00000480744 KIAA1324LA8MWY0 1029 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 NDUFS7O75251 213 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 MRPL33O75394 65 aaKnown RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 PGM3O95394 542 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 IGHV4-39P01824 125 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 PGRP06401 933 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 NR2F1P10589 423 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 KITP10721 976 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 IL7RP16871 459 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 FKBP2P26885 142 aaKnown RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 IL12AP29459 219 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 MAGEA8P43361 318 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 HTR3AP46098 478 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 CLK1P49759 484 aaKnown RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 POLR2HP52434 150 aaKnown RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 GNA13Q14344 377 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 CASP12Q6UXS9 341 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 DNAJC14Q6Y2X3 702 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 SSX8Q7RTT4 187 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 SPATA19Q7Z5L4 167 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 MGARPQ8TDB4 240 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 DDIT4LQ96D03 193 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 TRAF4Q9BUZ4 470 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 SLC38A1Q9H2H9 487 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 WDR55Q9H6Y2 383 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 GDF2Q9UK05 429 aaPredicted RBP13.44□□□□□ -0.26
LIMS3-203ENST00000480744 POU2F3Q9UKI9 436 aa13.44□□□□□ -0.26
LIMS3-203ENST00000480744 TMEM72A0PK05 275 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 AGAP5A6NIR3 686 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 DNPH1O43598 174 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 UQCRBP14927 111 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 EPHA3P29320 983 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 TACR3P29371 465 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 SLC35A1P78382 337 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 DMTNQ08495 405 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 COX20Q5RI15 118 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 AGBL2Q5U5Z8 902 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 C9orf135Q5VTT2 229 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 NXNQ6DKJ4 435 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 SLC22A25Q6T423 547 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 KLHL17Q6TDP4 642 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 TMEM108Q6UXF1 575 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 LRRC74BQ6ZQY2 392 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 ALPK2Q86TB3 2170 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 CMIPQ8IY22 773 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 OR52E4Q8NGH9 312 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 NAA11Q9BSU3 229 aaPredicted RBP13.43□□□□□ -0.26
LIMS3-203ENST00000480744 C1QTNF6Q9BXI9 259 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 REG4Q9BYZ8 158 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 ARGLU1Q9NWB6 273 aaPredicted RBP13.43□□□□□ -0.26
LIMS3-203ENST00000480744 ZNF446Q9NWS9 450 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 TAS2R16Q9NYV7 291 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 OSGIN1Q9UJX0 560 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 ABCA1O95477 2261 aa13.43□□□□□ -0.26
LIMS3-203ENST00000480744 SONP18583 2426 aaKnown RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 CFAP73A6NFT4 308 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 M0R1B8 84 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 CD8AP01732 235 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 TP53P04637 393 aaPredicted RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 DBIP07108 87 aaKnown RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 IMPDH2P12268 514 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 NTF4P34130 210 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 SLC16A1P53985 500 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 FOXG1P55316 489 aaPredicted RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 TXNL4AP83876 142 aaKnown RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 SPOCK1Q08629 439 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 LRRC74AQ0VAA2 488 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 MRPL2Q5T653 305 aaKnown RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 AGAP6Q5VW22 663 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 AP1ARQ63HQ0 302 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 HDXQ7Z353 690 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 PMM1Q92871 262 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 MTHFD2LQ9H903 347 aaPredicted RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 BARX1Q9HBU1 254 aaPredicted RBP13.42□□□□□ -0.26
LIMS3-203ENST00000480744 UPB1Q9UBR1 384 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 GPR45Q9Y5Y3 372 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 SLC25A15Q9Y619 301 aa13.42□□□□□ -0.26
LIMS3-203ENST00000480744 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
LIMS3-203ENST00000480744 RFXANKO14593 260 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 HDAC3O15379 428 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 ZNF208O43345 1280 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 SSX4O60224 188 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 EIF1BO60739 113 aaKnown RBP13.41□□□□□ -0.26
LIMS3-203ENST00000480744 KRT75O95678 551 aa13.41□□□□□ -0.26
LIMS3-203ENST00000480744 RPS4Y1P22090 263 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms