RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	BCHE	P06276	602 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	DANCR	P0C864	163 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	STAR	P49675	285 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC7A2	P52569	658 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	VLDLR	P98155	873 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	GPR68	Q15743	365 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	ZNF141	Q15928	474 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	SYPL1	Q16563	259 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	VMAC	Q2NL98	169 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	TMEM249	Q2WGJ8	235 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	RABL3	Q5HYI8	236 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	CCNJ	Q5T5M9	372 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	ANKRD34A	Q69YU3	496 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	EIF3M	Q7L2H7	374 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	CHMP1B	Q7LBR1	199 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC15A3	Q8IY34	581 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	ZNF610	Q8N9Z0	462 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	OTUB1	Q96FW1	271 aa	Predicted RBP	13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	TMEM19	Q96HH6	336 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	RHNO1	Q9BSD3	238 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	KLHL4	Q9C0H6	718 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	ALG2	Q9H553	416 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	PTGES2	Q9H7Z7	377 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	ABCD2	Q9UBJ2	740 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC35A3	Q9Y2D2	325 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	KCNE3	Q9Y6H6	103 aa		13.89	□□□□□ -0.19
HDLBP-238	ENST00000479894	MGAM2	Q2M2H8	2515 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894		A0A096LNT2	108 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	ELOVL7	A1L3X0	281 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	AGAP5	A6NIR3	686 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	GTPBP1	O00178	669 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	GPRIN2	O60269	458 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	ICOSLG	O75144	302 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	PGM3	O95394	542 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	STAMBP	O95630	424 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	IGHV4-39	P01824	125 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	UQCRB	P14927	111 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	IL7R	P16871	459 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	SRD5A2	P31213	254 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	PCGF2	P35227	344 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	LIPE	Q05469	1076 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	BNIP1	Q12981	228 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	GRAMD1B	Q3KR37	738 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	LIN52	Q52LA3	116 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	KLHL26	Q53HC5	615 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	TYW3	Q6IPR3	259 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	C6orf89	Q6UWU4	347 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	CALHM3	Q86XJ0	350 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	ZNF440	Q8IYI8	595 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	DEFB107A	Q8IZN7	70 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	ANKFN1	Q8N957	763 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	TOR1AIP2	Q8NFQ8	470 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC26A7	Q8TE54	656 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	RNF138	Q8WVD3	245 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	FBXW5	Q969U6	566 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	ZNF583	Q96ND8	569 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	TNFRSF13C	Q96RJ3	184 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	OR10A4	Q9H209	315 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	IKZF5	Q9H5V7	419 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	TAS2R10	Q9NYW0	307 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	PPP4R1L	Q9P1A2	415 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	TMEM181	Q9P2C4	612 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC13A4	Q9UKG4	626 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	MKLN1	Q9UL63	735 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	PROCR	Q9UNN8	238 aa		13.88	□□□□□ -0.19
HDLBP-238	ENST00000479894	NPIPB9	F8W1W9	429 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	EIF4E2	O60573	245 aa	Known RBP	13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	FCMR	O60667	390 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	OXSR1	O95747	527 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	IGKV1D-16	P01601	117 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SOD3	P08294	240 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SRD5A1	P18405	259 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	PTGDS	P41222	190 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SUMO3	P55854	103 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SIRPA	P78324	504 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	CHRNE	Q04844	493 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	ADRM1	Q16186	407 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	LIPN	Q5VXI9	398 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	FRRS1	Q6ZNA5	592 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	MICU2	Q8IYU8	434 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	WDSUB1	Q8N9V3	476 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	RBM15B	Q8NDT2	890 aa	Known RBP	13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	OR4C3	Q8NH37	302 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	NFKBID	Q8NI38	313 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC35B4	Q969S0	331 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SFXN2	Q96NB2	322 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	NODAL	Q96S42	347 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	CDRT15	Q96T59	188 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	BTBD10	Q9BSF8	475 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	GRIP2	Q9C0E4	1043 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SLC38A1	Q9H2H9	487 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	ESRP2	Q9H6T0	727 aa	Known RBP	13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	RNF122	Q9H9V4	155 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	CMTM6	Q9NX76	183 aa		13.87	□□□□□ -0.19
HDLBP-238	ENST00000479894	SERINC4	A6NH21	518 aa		13.86	□□□□□ -0.19
HDLBP-238	ENST00000479894	KCNAB3	O43448	404 aa		13.86	□□□□□ -0.19
HDLBP-238	ENST00000479894	ANGPTL1	O95841	491 aa		13.86	□□□□□ -0.19
HDLBP-238	ENST00000479894	CHRM4	P08173	479 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms