RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 DPRXA6NFQ7 191 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF716A6NP11 495 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 INAFM1C9JVW0 142 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 GOLGA8NF8WBI6 632 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 RFXANKO14593 260 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 IL6P05231 212 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 CDKN1AP38936 164 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC1A3P43003 542 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 DSCR9P59020 149 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 CHRNEQ04844 493 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 BST1Q10588 318 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 FUT5Q11128 374 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 GSTA3Q16772 222 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 LIN52Q52LA3 116 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC22A25Q6T423 547 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF621Q6ZSS3 439 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 C1orf162Q8NEQ5 155 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 LILRB1Q8NHL6 650 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 SLCO5A1Q9H2Y9 848 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 RMND5AQ9H871 391 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 FKRPQ9H9S5 495 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 THAP1Q9NVV9 213 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 DCTN4Q9UJW0 460 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 AMDHD2Q9Y303 409 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 ANP32DO95626 131 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 GPIP06744 558 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 PAX7P23759 505 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 CXCR1P25024 350 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 NUDT6P53370 316 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 CRISP3P54108 245 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 PGGHGQ32M88 737 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 PAQR6Q6TCH4 344 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 SEZ6L2Q6UXD5 910 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 OLIG3Q7RTU3 272 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 ADGRG3Q86Y34 549 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 FBXL14Q8N1E6 418 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 ANKRD42Q8N9B4 389 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF524Q96C55 264 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 RHNO1Q9BSD3 238 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 OR11A1Q9GZK7 315 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC38A1Q9H2H9 487 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 PIF1Q9H611 641 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 MOV10Q9HCE1 1003 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 NKIRAS1Q9NYS0 192 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 V9GYY5 206 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 DSCAMO60469 2012 aa12.74□□□□□ -0.37
SMARCE1-209ENST00000478349 A0A096LPI6 279 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 OR6C65A6NJZ3 312 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 SHISA9B4DS77 424 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 TLX2O43763 284 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 WNT11O96014 354 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 IGHV3-9P01782 118 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 CCNA2P20248 432 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 TACR3P29371 465 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 NME5P56597 212 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 UFM1P61960 85 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 PHC1P78364 1004 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 LARS2Q15031 903 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 MRPL2Q5T653 305 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 NXNQ6DKJ4 435 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF544Q6NX49 715 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 CLEC2AQ6UVW9 174 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 MSANTD1Q6ZTZ1 278 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 ANKFN1Q8N957 763 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 OR52N5Q8NH56 324 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 CNOT9Q92600 299 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 DHRS9Q9BPW9 319 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 CBLN4Q9NTU7 201 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 PNPOQ9NVS9 261 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 OSGIN1Q9UJX0 560 aa12.73□□□□□ -0.37
SMARCE1-209ENST00000478349 ROS1P08922 2347 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 M0R1B8 84 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 SDHDO14521 159 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC22A3O75751 556 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 KRT33AO76009 404 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 VAMP5O95183 116 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 IGHV4-39P01824 125 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 CHRM4P08173 479 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 ALDOCP09972 364 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 RPS4Y1P22090 263 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 CD40P25942 277 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 TTKP33981 857 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 ACVR1BP36896 505 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 CRATP43155 626 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF83P51522 516 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 H3F3AP84243 136 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 CHRNB3Q05901 458 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms