RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ADARP55265 1226 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 PAX9P55771 341 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 PFN3P60673 137 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SRP54P61011 504 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 RAB10P61026 200 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CSNK2BP67870 215 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CYCSP99999 105 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 RASGEF1BQ0VAM2 473 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 HSPA14Q0VDF9 509 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 ELOCQ15369 112 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 EXT1Q16394 746 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 BCL7AQ4VC05 210 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 LACTB2Q53H82 288 aaPredicted RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 ZNF789Q5FWF6 425 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CTSL3PQ5NE16 218 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 AGBL2Q5U5Z8 902 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TTC23LQ6PF05 361 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 BTN2A1Q7KYR7 527 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TAF8Q7Z7C8 310 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 AMZ2Q86W34 360 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 PARGQ86W56 976 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 GKN2Q86XP6 184 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 IQCKQ8N0W5 287 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 KRT222Q8N1A0 295 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CLDN19Q8N6F1 224 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SIDT2Q8NBJ9 832 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 SLC37A3Q8NCC5 494 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 OR7A2PQ8NGA2 310 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 OCC1Q8TAD7 63 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 MAPK15Q8TD08 544 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 ACMSDQ8TDX5 336 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 ASZ1Q8WWH4 475 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 RASL10AQ92737 203 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TSACCQ96A04 125 aaPredicted RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 PGM2Q96G03 612 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 BMFQ96LC9 184 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 FOPNLQ96NB1 174 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 GPR21Q99679 349 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 GPR22Q99680 433 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TIMM29Q9BSF4 260 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CCM2Q9BSQ5 444 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 GSDMCQ9BYG8 508 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CAB39LQ9H9S4 337 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 NMRAL1Q9HBL8 299 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 POPDC3Q9HBV1 291 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TMBIM4Q9HC24 238 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SENP1Q9P0U3 644 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SPASTQ9UBP0 616 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 APOBEC3BQ9UH17 382 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 LGALS13Q9UHV8 139 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 PILRBQ9UKJ0 227 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 PRDM4Q9UKN5 801 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SLC17A4Q9Y2C5 497 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 ACOT9Q9Y305 439 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 DHRS7Q9Y394 339 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TTC28Q96AY4 2481 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 LRP4O75096 1905 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TMEM131Q92545 1883 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 KNL1Q8NG31 2342 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 IQCF5A8MTL0 148 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 C10orf142B7Z368 130 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 GOLGA8RI6L899 631 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CHUKO15111 745 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 YKT6O15498 198 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 IDH3BO43837 385 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 DFNA5O60443 496 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CSF2P04141 144 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 RPN2P04844 631 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 C2P06681 752 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 RETP07949 1114 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 GSTA1P08263 222 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 RBP1P09455 135 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 HIST1H2AGP0C0S8 130 aaPredicted RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 CCDC166P0CW27 439 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 MPC1LP0DKB6 136 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 ALPPL2P10696 532 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 NEFHP12036 1026 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 ADRA2CP18825 462 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 EPORP19235 508 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 TAC1P20366 129 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CYP2A7P20853 494 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CD9P21926 228 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 GCAP28676 217 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 HPDP32754 393 aaPredicted RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 CA5AP35218 305 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SLC26A3P40879 764 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 ACTR1BP42025 376 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CDX1P47902 265 aaPredicted RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 CDKN2DP55273 166 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 TAS2R39P59534 338 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 ACTR1AP61163 376 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 MAGOHP61326 146 aaKnown RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 ATP6V0D1P61421 351 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 ABRQ12979 859 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 RPA4Q13156 261 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 FZD2Q14332 565 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 NFE2L1Q14494 772 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 OPCMLQ14982 345 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 FAM83EQ2M2I3 478 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 PYCR3Q53H96 274 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms