RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 MT-ND1P03886 318 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 ENPP1P22413 925 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 RASSF2P50749 326 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 CARD18P57730 90 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 MYBPHQ13203 477 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 CDSNQ15517 529 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 ELOA3BQ3SY89 546 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 C4orf17Q53FE4 359 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 PPP4R4Q6NUP7 873 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 C3orf33Q6P1S2 294 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 ULK3Q6PHR2 472 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 PM20D2Q8IYS1 436 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 EID3Q8N140 333 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 NAXEQ8NCW5 288 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 ELOA3Q8NG57 546 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 FNDC9Q8TBE3 224 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 GEMIN6Q8WXD5 167 aaKnown RBP14.23□□□□□ -0.13
COPS3-207ENST00000477299 MCUR1Q96AQ8 359 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 KTI12Q96EK9 354 aaPredicted RBP14.23□□□□□ -0.13
COPS3-207ENST00000477299 SLC41A3Q96GZ6 507 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 CCDC120Q96HB5 630 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 UCN2Q96RP3 112 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 SERINC1Q9NRX5 453 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 NDUFAF4Q9P032 175 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 CLCF1Q9UBD9 225 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 SAMD4AQ9UPU9 718 aaKnown RBP14.23□□□□□ -0.13
COPS3-207ENST00000477299 FLNCQ14315 2725 aa14.23□□□□□ -0.13
COPS3-207ENST00000477299 UBR5O95071 2799 aaPredicted RBP14.22□□□□□ -0.13
COPS3-207ENST00000477299 A0A087WUJ7 227 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 TRAPPC13A5PLN9 417 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 FIGNL2A6NMB9 653 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 LRRN3E7EW58 273 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 E9PLN8 166 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 RAMP1O60894 148 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 NPIPB7O75200 414 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 PRSS23O95084 383 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 DIO1P49895 249 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 AGFG1P52594 562 aaKnown RBP14.22□□□□□ -0.13
COPS3-207ENST00000477299 TAS2R41P59536 307 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 GABPB1Q06547 395 aaPredicted RBP14.22□□□□□ -0.13
COPS3-207ENST00000477299 LTBQ06643 244 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 TRAP1Q12931 704 aaKnown RBP14.22□□□□□ -0.13
COPS3-207ENST00000477299 FOXF2Q12947 444 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 PON3Q15166 354 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 SGCBQ16585 318 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 ZNF613Q6PF04 617 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 B3GNT6Q6ZMB0 384 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 TMPPEQ6ZT21 453 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 ESPNLQ6ZVH7 1005 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 CCDC71Q8IV32 467 aaPredicted RBP14.22□□□□□ -0.13
COPS3-207ENST00000477299 DNAJA4Q8WW22 397 aaPredicted RBP14.22□□□□□ -0.13
COPS3-207ENST00000477299 TAAR8Q969N4 342 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 SLC47A1Q96FL8 570 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 VKORC1Q9BQB6 163 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 PTDSS2Q9BVG9 487 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 EVA1AQ9H8M9 152 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 MAN2C1Q9NTJ4 1040 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 ENPP4Q9Y6X5 453 aa14.22□□□□□ -0.13
COPS3-207ENST00000477299 MYO18BQ8IUG5 2567 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 A0A0G2JNJ9 132 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 A8MVM7 634 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 SULT2B1O00204 365 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 ZNF208O43345 1280 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 IFNW1P05000 195 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 GABRA1P14867 456 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 CBLP22681 906 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 SLC7A1P30825 629 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 RPS5P46782 204 aaKnown RBP14.21□□□□□ -0.13
COPS3-207ENST00000477299 CASP6P55212 293 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 OR2B6P58173 313 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 KCNC4Q03721 635 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.21□□□□□ -0.13
COPS3-207ENST00000477299 C1orf140Q5VVS0 124 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 NSUN5P2Q63ZY6 315 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 MEX3DQ86XN8 651 aaKnown RBP14.21□□□□□ -0.13
COPS3-207ENST00000477299 TMEM255BQ8WV15 326 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 ZNF300Q96RE9 604 aaPredicted RBP14.21□□□□□ -0.13
COPS3-207ENST00000477299 MUC13Q9H3R2 512 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 SEC14L4Q9UDX3 406 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 Q9UFV3 132 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 CLEC4AQ9UMR7 237 aa14.21□□□□□ -0.13
COPS3-207ENST00000477299 ASH1LQ9NR48 2969 aaKnown RBP14.2□□□□□ -0.14
COPS3-207ENST00000477299 CD8B2A6NJW9 211 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 KPNA4O00629 521 aaPredicted RBP14.2□□□□□ -0.14
COPS3-207ENST00000477299 CHP2O43745 196 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 PIP5K1CO60331 668 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 ZG16O60844 167 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 OR5F1O95221 314 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 FPR1P21462 350 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 UGT2B15P54855 530 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 RPS3AP61247 264 aaKnown RBP14.2□□□□□ -0.14
COPS3-207ENST00000477299 FLOT2Q14254 428 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 TBPL2Q6SJ96 375 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 CHMP1BQ7LBR1 199 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 LIX1LQ8IVB5 337 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 CCDC103Q8IW40 242 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 ADGRG5Q8IZF4 528 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 GCNT2Q8N0V5 402 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 PFN4Q8NHR9 129 aa14.2□□□□□ -0.14
COPS3-207ENST00000477299 ZNF775Q96BV0 537 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms