RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 JSRP1Q96MG2 331 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-211ENST00000476772 UTP23Q9BRU9 249 aaKnown RBP26.14■■□□□ 1.78
VEGFA-211ENST00000476772 YTHDF1Q9BYJ9 559 aaKnown RBP26.14■■□□□ 1.78
VEGFA-211ENST00000476772 ZC3H12DA2A288 527 aaKnown RBP26.13■■□□□ 1.77
VEGFA-211ENST00000476772 ZNF891A8MT65 544 aaPredicted RBP26.13■■□□□ 1.77
VEGFA-211ENST00000476772 HCN1O60741 890 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 SNX4O95219 450 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 SMIM18P0DKX4 95 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 DNASE1L1P49184 302 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 SOX8P57073 446 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 FHL1Q13642 323 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 ZNF74Q16587 644 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 SLC25A53Q5H9E4 307 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 RBM48Q5RL73 367 aaKnown RBP26.13■■□□□ 1.77
VEGFA-211ENST00000476772 SPINK14Q6IE38 97 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 OR1J4Q8NGS1 313 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 TNFRSF13CQ96RJ3 184 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 ENKD1Q9H0I2 346 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 GPR83Q9NYM4 423 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 TVP23BQ9NYZ1 205 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 POLHQ9Y253 713 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 DCHS1Q96JQ0 3298 aa26.13■■□□□ 1.77
VEGFA-211ENST00000476772 HTR3EA5X5Y0 456 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 RCBTB2O95199 551 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 WDPCPO95876 746 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 TCEA1P23193 301 aaKnown RBP26.12■■□□□ 1.77
VEGFA-211ENST00000476772 APOBEC1P41238 236 aaKnown RBP26.12■■□□□ 1.77
VEGFA-211ENST00000476772 SMN1Q16637 294 aaKnown RBP26.12■■□□□ 1.77
VEGFA-211ENST00000476772 ZBED5Q49AG3 693 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 RPL13AP3Q6NVV1 102 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 SMARCD3Q6STE5 483 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 THSD4Q6ZMP0 1018 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 PTCHD4Q6ZW05 846 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 C10orf53Q8N6V4 93 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 POC1BQ8TC44 478 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 KCNE4Q8WWG9 221 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 FGF11Q92914 225 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 MRGPRX4Q96LA9 322 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 MOGAT1Q96PD6 335 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 SIGLEC12Q96PQ1 595 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 MCCC2Q9HCC0 563 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 FAM47E-STBD1D6RA91 191 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 SLC1A7O00341 560 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 TRIM3O75382 744 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-211ENST00000476772 NEURL1O76050 574 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 RPS5P46782 204 aaKnown RBP26.12■■□□□ 1.77
VEGFA-211ENST00000476772 SLC9A3P48764 834 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 LTBQ06643 244 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 CRTC2Q53ET0 693 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-211ENST00000476772 TIGD3Q6B0B8 471 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 BPIFB6Q8NFQ5 453 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 OR52L1Q8NGH7 329 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 TAAR8Q969N4 342 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 GNRHR2Q96P88 292 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 TIMMDC1Q9NPL8 285 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 PLA2G3Q9NZ20 509 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 ZNF337Q9Y3M9 751 aa26.12■■□□□ 1.77
VEGFA-211ENST00000476772 A8MVM7 634 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 TLX3O43711 291 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-211ENST00000476772 NPIPB7O75200 414 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 BMP7P18075 431 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 CRHBPP24387 322 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 CDH15P55291 814 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 BLMHQ13867 455 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 PGGHGQ32M88 737 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 C1QL3Q5VWW1 255 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 OR2T33Q8NG76 320 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 DNAJA3Q96EY1 480 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 IL4I1Q96RQ9 567 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 OR11A1Q9GZK7 315 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 UBQLN3Q9H347 655 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 CHRNA9Q9UGM1 479 aa26.11■■□□□ 1.77
VEGFA-211ENST00000476772 CELSR3Q9NYQ7 3312 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 TRAV36DV7A0A075B6V5 113 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 TRIM64A6NGJ6 449 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 XPNPEP2O43895 674 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 MPZL2O60487 215 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 TOP3AQ13472 1001 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-211ENST00000476772 AGAP7PQ5VUJ5 663 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 LIPHQ8WWY8 451 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 ZNF566Q969W8 418 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 AGAP4Q96P64 663 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 DEPPQ9NTK1 212 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 ASPMQ8IZT6 3477 aa26.1■■□□□ 1.77
VEGFA-211ENST00000476772 PRKYO43930 277 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 PCYT1AP49585 367 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 GPR85P60893 370 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 FOXK1P85037 733 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 OR1C1Q15619 314 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 GXYLT1Q4G148 440 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 TCEANCQ8N8B7 351 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 TSPAN14Q8NG11 270 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 STK35Q8TDR2 534 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 RELTQ969Z4 430 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 PTDSS2Q9BVG9 487 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 POLDIP3Q9BY77 421 aaKnown RBP26.09■■□□□ 1.77
VEGFA-211ENST00000476772 NANSQ9NR45 359 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 KLK10O43240 276 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 EFSO43281 561 aa26.09■■□□□ 1.77
VEGFA-211ENST00000476772 BGLAPP02818 100 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms