RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TMEM123Q8N131 208 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 CLDN19Q8N6F1 224 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 BBS1Q8NFJ9 593 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 STARD8Q92502 1023 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 UPRTQ96BW1 309 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 GSDMAQ96QA5 445 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 IL4I1Q96RQ9 567 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 RIT2Q99578 217 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 CHP1Q99653 195 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 SLC30A2Q9BRI3 323 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 ROPN1BQ9BZX4 212 aaPredicted RBP4.18□□□□□ -1.74
SMC5-203ENST00000475540 NEK6Q9HC98 313 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 SMOXQ9NWM0 555 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 HOXC10Q9NYD6 342 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 GNG12Q9UBI6 72 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 ZNF221Q9UK13 617 aa4.18□□□□□ -1.74
SMC5-203ENST00000475540 EIF3LQ9Y262 564 aaKnown RBP4.18□□□□□ -1.74
SMC5-203ENST00000475540 SNTNA6NMZ2 147 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 TCP11X1B4DZS4 312 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 FOXE1O00358 373 aaPredicted RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 SLITRK3O94933 977 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 JCHAINP01591 159 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 KRT14P02533 472 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 SEMG1P04279 462 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 STSP08842 583 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 RHOXF2BP0C7M4 288 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 PABPC4LP0CB38 370 aaKnown RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 ZNF853P0CG23 659 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 HSMCR30P0CW71 290 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 RALBP11234 206 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 H2AFXP16104 143 aaPredicted RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 LAP3P28838 519 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 MAGEA8P43361 318 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 SEC61GP60059 68 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 ZNF45Q02386 682 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 TGM3Q08188 693 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 HERPUD1Q15011 391 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 ZNF658BQ4V348 819 aaPredicted RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 CLEC2AQ6UVW9 174 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 KDM7AQ6ZMT4 941 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 BZW1Q7L1Q6 419 aaKnown RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 ANKRD37Q7Z713 158 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 ACOT1Q86TX2 421 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 TMEM17Q86X19 198 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 TGIF2LXQ8IUE1 241 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 NANPQ8TBE9 248 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 FAM3CQ92520 227 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 RAPGEF5Q92565 580 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 MCUR1Q96AQ8 359 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 FGGYQ96C11 551 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 TMEM80Q96HE8 168 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 AMDHD1Q96NU7 426 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 RBM14Q96PK6 669 aaKnown RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 BCL7BQ9BQE9 202 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 EBF4Q9BQW3 602 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 RHOXF2Q9BQY4 288 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 C11orf70Q9BRQ4 267 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 IQCGQ9H095 443 aaKnown RBP4.17□□□□□ -1.74
SMC5-203ENST00000475540 MCCC2Q9HCC0 563 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 ZFP14Q9HCL3 533 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 MYOZ2Q9NPC6 264 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 SLC2A8Q9NY64 477 aa4.17□□□□□ -1.74
SMC5-203ENST00000475540 SPOPO43791 374 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 TIMM8AO60220 97 aaPredicted RBP4.16□□□□□ -1.74
SMC5-203ENST00000475540 NEMFO60524 1076 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 TSPAN12O95859 305 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 IGKV3-11P04433 115 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 CD55P08174 381 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 ANXA3P12429 323 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 ZNF32P17041 273 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 TBXA2RP21731 343 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 PCMT1P22061 227 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 RPL4P36578 427 aaKnown RBP4.16□□□□□ -1.74
SMC5-203ENST00000475540 EPS15P42566 896 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 MAGEA1P43355 309 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 ETV1P50549 477 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 OTUD4Q01804 1114 aaKnown RBP4.16□□□□□ -1.74
SMC5-203ENST00000475540 GGTA1PQ4G0N0 100 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 CCDC80Q76M96 950 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 KIAA1328Q86T90 577 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 BPIFB2Q8N4F0 458 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 CEP112Q8N8E3 955 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 LINC01555Q8NAE3 123 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 TRPV1Q8NER1 839 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 STXBP6Q8NFX7 210 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 OR4D5Q8NGN0 318 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 M1APQ8TC57 530 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 DNAJA4Q8WW22 397 aaPredicted RBP4.16□□□□□ -1.74
SMC5-203ENST00000475540 NEIL2Q969S2 332 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 ADIPOR1Q96A54 375 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 SMIM14Q96QK8 99 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 TUBGCP2Q9BSJ2 902 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 FEM1AQ9BSK4 669 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 RHOJQ9H4E5 214 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 ADAM28Q9UKQ2 775 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 PPIAL4AQ9Y536 164 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 NPTNQ9Y639 398 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 MAD1L1Q9Y6D9 718 aa4.16□□□□□ -1.74
SMC5-203ENST00000475540 ESYT2A0FGR8 921 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 NPIPA7E9PJI5 369 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms