RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CPPED1Q9BRF8 314 aaPredicted RBP13.49□□□□□ -0.25
VARS-223ENST00000474643 GSX1Q9H4S2 264 aaPredicted RBP13.49□□□□□ -0.25
VARS-223ENST00000474643 ARMCX1Q9P291 453 aa13.49□□□□□ -0.25
VARS-223ENST00000474643 FLNAP21333 2647 aaKnown RBP13.49□□□□□ -0.25
VARS-223ENST00000474643 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 MRASO14807 208 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 PRKD3O94806 890 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 NID1P14543 1247 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 PRKCAP17252 672 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 SLC6A2P23975 617 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 PSMA4P25789 261 aaKnown RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 HOXC12P31275 282 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 CDK6Q00534 326 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 MERTKQ12866 999 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 SCARB2Q14108 478 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 GUSBP1Q15486 140 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 TRMT5Q32P41 509 aaKnown RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 MRPL2Q5T653 305 aaKnown RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 REP15Q6BDI9 236 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 REEP3Q6NUK4 255 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 C3orf33Q6P1S2 294 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 CLEC9AQ6UXN8 241 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 STAC2Q6ZMT1 411 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 ZNF704Q6ZNC4 412 aaPredicted RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 TRPM8Q7Z2W7 1104 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 YTHDF3Q7Z739 585 aaKnown RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 VRK2Q86Y07 508 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 KRT73Q86Y46 540 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 SLC43A2Q8N370 569 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 FITM2Q8N6M3 262 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 RNF128Q8TEB7 428 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 TMEM171Q8WVE6 324 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 ST8SIA1Q92185 356 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 PLPPR2Q96GM1 343 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 MRGPRX4Q96LA9 322 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 ANKRD27Q96NW4 1050 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 HS3ST6Q96QI5 342 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 PIP5K1AQ99755 562 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 CXorf56Q9H5V9 222 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 GID8Q9NWU2 228 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 KLHL9Q9P2J3 617 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 KLHL13Q9P2N7 655 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 ZNF443Q9Y2A4 671 aaPredicted RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 GPR52Q9Y2T5 361 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 IFT52Q9Y366 437 aa13.48□□□□□ -0.25
VARS-223ENST00000474643 SPIN1Q9Y657 262 aaPredicted RBP13.48□□□□□ -0.25
VARS-223ENST00000474643 TRBV5-3A0A0A0MS03 114 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 FBP2O00757 339 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 SIAH2O43255 324 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 PGM3O95394 542 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 ARAFP10398 606 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 BMP2P12643 396 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 GPX2P18283 190 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 IL11P20809 199 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 SHC1P29353 583 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 GABPB1Q06547 395 aaPredicted RBP13.47□□□□□ -0.25
VARS-223ENST00000474643 MAPK11Q15759 364 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 ZNF311Q5JNZ3 666 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 PRAMEF8Q5VWM4 474 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 PRAMEF7Q5VXH5 474 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 HACD2Q6Y1H2 254 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 Q71RC1 249 aaPredicted RBP13.47□□□□□ -0.25
VARS-223ENST00000474643 CXorf67Q86X51 503 aaPredicted RBP13.47□□□□□ -0.25
VARS-223ENST00000474643 ZNF440Q8IYI8 595 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 LRRC75A-AS1Q8N1F1 130 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 CNOT9Q92600 299 aaKnown RBP13.47□□□□□ -0.25
VARS-223ENST00000474643 Q96MF0 132 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 ZNF607Q96SK3 696 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 SH3GL1Q99961 368 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 SPATA5L1Q9BVQ7 753 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 HDHD5Q9BXW7 423 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 IKZF5Q9H5V7 419 aa13.47□□□□□ -0.25
VARS-223ENST00000474643 EXOSC3Q9NQT5 275 aaKnown RBP13.47□□□□□ -0.25
VARS-223ENST00000474643 DSPPQ9NZW4 1301 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 IGHV3-15A0A0B4J1V0 119 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 A0A1W2PNR3 127 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 CLOCKO15516 846 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 BCAS1O75363 584 aaPredicted RBP13.46□□□□□ -0.25
VARS-223ENST00000474643 YES1P07947 543 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 THBS1P07996 1170 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 TFPIP10646 304 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 COX4I1P13073 169 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 PSMB1P20618 241 aaKnown RBP13.46□□□□□ -0.25
VARS-223ENST00000474643 RPS4Y1P22090 263 aaKnown RBP13.46□□□□□ -0.25
VARS-223ENST00000474643 ENPP1P22413 925 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.25
VARS-223ENST00000474643 SESN3P58005 492 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 ZSWIM7Q19AV6 140 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 AP1ARQ63HQ0 302 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 ZNF836Q6ZNA1 936 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 TREML1Q86YW5 311 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 TUSC5Q8IXB3 177 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 POU5F2Q8N7G0 328 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 C11orf65Q8NCR3 313 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 FAM71CQ8NEG0 241 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 KISS1RQ969F8 398 aaPredicted RBP13.46□□□□□ -0.25
VARS-223ENST00000474643 S100PBPQ96BU1 408 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms