RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 WIF1Q9Y5W5 379 aa18.02■□□□□ 0.47
SSR1-204ENST00000474597 COMMD3-BMI1R4GMX3 469 aa18.02■□□□□ 0.47
SSR1-204ENST00000474597 KNTC1P50748 2209 aa18.02■□□□□ 0.47
SSR1-204ENST00000474597 IRGMA1A4Y4 181 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 ADAM10O14672 748 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 PPP1R3DO95685 299 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 HTR3AP46098 478 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 GAS1P54826 345 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 FOXK2Q01167 660 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 ZNF74Q16587 644 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 ZNF791Q3KP31 576 aaPredicted RBP18.01■□□□□ 0.47
SSR1-204ENST00000474597 RPS19BP1Q86WX3 136 aaKnown RBP18.01■□□□□ 0.47
SSR1-204ENST00000474597 LRRC17Q8N6Y2 441 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 ZNF420Q8TAQ5 688 aaPredicted RBP18.01■□□□□ 0.47
SSR1-204ENST00000474597 ISOC1Q96CN7 298 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 TMEM80Q96HE8 168 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 B3GNT4Q9C0J1 378 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 MED11Q9P086 117 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 PCDHGB6Q9Y5F9 930 aa18.01■□□□□ 0.47
SSR1-204ENST00000474597 TMED7-TICAM2A0A0A6YYA0 188 aa18■□□□□ 0.47
SSR1-204ENST00000474597 KDM4EB2RXH2 506 aaPredicted RBP18■□□□□ 0.47
SSR1-204ENST00000474597 DKK1O94907 266 aa18■□□□□ 0.47
SSR1-204ENST00000474597 SLC2A10O95528 541 aa18■□□□□ 0.47
SSR1-204ENST00000474597 MSX1P28360 303 aa18■□□□□ 0.47
SSR1-204ENST00000474597 RPL4P36578 427 aaKnown RBP18■□□□□ 0.47
SSR1-204ENST00000474597 ST13P50502 369 aaKnown RBP18■□□□□ 0.47
SSR1-204ENST00000474597 GP2P55259 537 aaKnown RBP18■□□□□ 0.47
SSR1-204ENST00000474597 CDH11P55287 796 aa18■□□□□ 0.47
SSR1-204ENST00000474597 PRPS1P60891 318 aa18■□□□□ 0.47
SSR1-204ENST00000474597 KLHL22Q53GT1 634 aa18■□□□□ 0.47
SSR1-204ENST00000474597 CXXC5Q7LFL8 322 aaKnown RBP18■□□□□ 0.47
SSR1-204ENST00000474597 DND1Q8IYX4 353 aaKnown RBP18■□□□□ 0.47
SSR1-204ENST00000474597 TMEM156Q8N614 296 aa18■□□□□ 0.47
SSR1-204ENST00000474597 ST8SIA1Q92185 356 aa18■□□□□ 0.47
SSR1-204ENST00000474597 CRELD1Q96HD1 420 aa18■□□□□ 0.47
SSR1-204ENST00000474597 FN3KQ9H479 309 aa18■□□□□ 0.47
SSR1-204ENST00000474597 P4HTMQ9NXG6 502 aa18■□□□□ 0.47
SSR1-204ENST00000474597 TMED7Q9Y3B3 224 aa18■□□□□ 0.47
SSR1-204ENST00000474597 RIIAD1A6NNX1 92 aa18■□□□□ 0.47
SSR1-204ENST00000474597 ZNF701M0R085 212 aaPredicted RBP18■□□□□ 0.47
SSR1-204ENST00000474597 HIST1H2ABP04908 130 aa18■□□□□ 0.47
SSR1-204ENST00000474597 LCKP06239 509 aa18■□□□□ 0.47
SSR1-204ENST00000474597 HK1P19367 917 aa18■□□□□ 0.47
SSR1-204ENST00000474597 DCKP27707 260 aa18■□□□□ 0.47
SSR1-204ENST00000474597 CASP3P42574 277 aa18■□□□□ 0.47
SSR1-204ENST00000474597 EGR4Q05215 589 aa18■□□□□ 0.47
SSR1-204ENST00000474597 SYT6Q5T7P8 510 aaPredicted RBP18■□□□□ 0.47
SSR1-204ENST00000474597 UBE2UQ5VVX9 321 aa18■□□□□ 0.47
SSR1-204ENST00000474597 NXNL2Q5VZ03 156 aa18■□□□□ 0.47
SSR1-204ENST00000474597 ARHGAP11AQ6P4F7 1023 aa18■□□□□ 0.47
SSR1-204ENST00000474597 HIST3H2AQ7L7L0 130 aa18■□□□□ 0.47
SSR1-204ENST00000474597 TMPRSS12Q86WS5 348 aa18■□□□□ 0.47
SSR1-204ENST00000474597 RAB43Q86YS6 212 aa18■□□□□ 0.47
SSR1-204ENST00000474597 HIST1H2ACQ93077 130 aa18■□□□□ 0.47
SSR1-204ENST00000474597 KTI12Q96EK9 354 aaPredicted RBP18■□□□□ 0.47
SSR1-204ENST00000474597 CDCA4Q9BXL8 241 aa18■□□□□ 0.47
SSR1-204ENST00000474597 FAM117AQ9C073 453 aa18■□□□□ 0.47
SSR1-204ENST00000474597 CMC2Q9NRP2 79 aa18■□□□□ 0.47
SSR1-204ENST00000474597 M0R3G1 203 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 SUSD5O60279 629 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 TRMUO75648 421 aaKnown RBP17.99■□□□□ 0.47
SSR1-204ENST00000474597 IFNGP01579 166 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 ZNF3P17036 446 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 PTGDSP41222 190 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 RPS5P46782 204 aaKnown RBP17.99■□□□□ 0.47
SSR1-204ENST00000474597 ZNF41P51814 821 aaPredicted RBP17.99■□□□□ 0.47
SSR1-204ENST00000474597 MLF1P58340 268 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 GABREP78334 506 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 FHL1Q13642 323 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 CPOQ8IVL8 374 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 GID4Q8IVV7 300 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 ERMAPQ96PL5 475 aaPredicted RBP17.99■□□□□ 0.47
SSR1-204ENST00000474597 NDEL1Q9GZM8 345 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 HINT3Q9NQE9 182 aaKnown RBP17.99■□□□□ 0.47
SSR1-204ENST00000474597 RYDENQ9NUL5 291 aaKnown RBP17.99■□□□□ 0.47
SSR1-204ENST00000474597 HPF1Q9NWY4 346 aa17.99■□□□□ 0.47
SSR1-204ENST00000474597 TRAV36DV7A0A075B6V5 113 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 LOC101059948A0A1B0GTJ6 334 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 PRR23D1E9PI22 279 aaPredicted RBP17.98■□□□□ 0.47
SSR1-204ENST00000474597 BLOC1S5-TXNDC5H3BN57 136 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 MASP2O00187 686 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 RAB36O95755 333 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 PRR23D2P0DMB1 279 aaPredicted RBP17.98■□□□□ 0.47
SSR1-204ENST00000474597 PEPDP12955 493 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 F8A1P23610 371 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 GSTT1P30711 240 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 MTNR1AP48039 350 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 SNTA1Q13424 505 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 AADACL4Q5VUY2 407 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 B3GNT6Q6ZMB0 384 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 DPY19L2P2Q6ZN68 376 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 IGFN1Q86VF2 1251 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 CACTIN-AS1Q8N1I8 211 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 LIPHQ8WWY8 451 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 RNFT2Q96EX2 444 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 TSC22D3Q99576 134 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 CXorf56Q9H5V9 222 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 VDAC3Q9Y277 283 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 ERGIC3Q9Y282 383 aa17.98■□□□□ 0.47
SSR1-204ENST00000474597 CHCHD2Q9Y6H1 151 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms