RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SEZ6L2Q6UXD5 910 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 MSANTD1Q6ZTZ1 278 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 LILRB1Q8NHL6 650 aaPredicted RBP17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 PNPT1Q8TCS8 783 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 SMAP2Q8WU79 429 aaPredicted RBP17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 MAELQ96JY0 434 aaKnown RBP17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 NAA11Q9BSU3 229 aaPredicted RBP17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 OR11A1Q9GZK7 315 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 RMND5AQ9H871 391 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 ZIM2Q9NZV7 527 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 TMED7Q9Y3B3 224 aa17.99■□□□□ 0.47
PDLIM4-206ENST00000474421 DPRXA6NFQ7 191 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 OR5H1A6NKK0 313 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ADAM11O75078 769 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 MRPL33O75394 65 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ERLIN1O75477 346 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ANP32DO95626 131 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 C1QCP02747 245 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 CCNA2P20248 432 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 EDNRAP25101 427 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 MAGOHP61326 146 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ZSWIM7Q19AV6 140 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 COX20Q5RI15 118 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 MRPL2Q5T653 305 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ZNF433Q8N7K0 673 aaPredicted RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 GTPBP3Q969Y2 492 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 RADILQ96JH8 1075 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 FAIMQ9NVQ4 179 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 PARPBPQ9NWS1 579 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 ASB6Q9NWX5 421 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 THUMPD1Q9NXG2 353 aaKnown RBP17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 OSGIN1Q9UJX0 560 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 CSPG4Q6UVK1 2322 aa17.98■□□□□ 0.47
PDLIM4-206ENST00000474421 HIVEP2P31629 2446 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 A0A1W2PP18 115 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 CIB4A0PJX0 185 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 OVOL3O00110 214 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 AP3D1O14617 1153 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 DANCRP0C864 163 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 ZCCHC18P0CG32 403 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 TACR3P29371 465 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 H3F3AP84243 136 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 EPS8Q12929 822 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 ITCHQ96J02 903 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 TRIM2Q9C040 744 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 CACYBPQ9HB71 228 aaKnown RBP17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 SDR39U1Q9NRG7 319 aaPredicted RBP17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 TAS2R16Q9NYV7 291 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 SLC9A8Q9Y2E8 581 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 ZANQ9Y493 2812 aa17.97■□□□□ 0.47
PDLIM4-206ENST00000474421 TMEM247A6NEH6 219 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 CCT8L1PA6NM43 557 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 SOD3P08294 240 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 CRATP43155 626 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 CRISP3P54108 245 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 LIN52Q52LA3 116 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 OR7E24Q6IFN5 339 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 KLHL17Q6TDP4 642 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 CCDC103Q8IW40 242 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 KBTBD8Q8NFY9 601 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 ALG2Q9H553 416 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 ARMC7Q9H6L4 198 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 MALT1Q9UDY8 824 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 MGAT4BQ9UQ53 548 aa17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 FN1P02751 2386 aaKnown RBP17.96■□□□□ 0.47
PDLIM4-206ENST00000474421 TMEM72A0PK05 275 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 CDHR4A6H8M9 788 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 KLF11O14901 512 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 UBDO15205 165 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 RAD51DO75771 328 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 IGHV3-9P01782 118 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 CXCR1P25024 350 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 IDUAP35475 653 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 COPZ1P61923 177 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 LARS2Q15031 903 aaKnown RBP17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 SLC9B1Q4ZJI4 515 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 PAQR6Q6TCH4 344 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 TMEM108Q6UXF1 575 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 ATG4DQ86TL0 474 aaPredicted RBP17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 OR52P1PQ8NH57 321 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 TLCD1Q96CP7 247 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 DNAJA3Q96EY1 480 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 GRIP2Q9C0E4 1043 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 ADAM19Q9H013 955 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 TPT1P8Q9HAU6 139 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 TMBIM4Q9HC24 238 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 CISD1Q9NZ45 108 aaKnown RBP17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 ZNF232Q9UNY5 417 aa17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 MAGED1Q9Y5V3 778 aaPredicted RBP17.95■□□□□ 0.46
PDLIM4-206ENST00000474421 ABCD4O14678 606 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 GPIP06744 558 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 ETFAP13804 333 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 POLR2JP52435 117 aaKnown RBP17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 MVDP53602 400 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 CDH11P55287 796 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 DSTNP60981 165 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 FAPQ12884 760 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 CLEC12BQ2HXU8 276 aa17.94■□□□□ 0.46
PDLIM4-206ENST00000474421 C1QTNF12Q5T7M4 302 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms