RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CPN1P15169 458 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 CCNA2P20248 432 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 ACVR2AP27037 513 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 HTR2AP28223 471 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 TACR3P29371 465 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 SLC1A3P43003 542 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 HTR3AP46098 478 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 POLR2HP52434 150 aaKnown RBP8.17□□□□□ -1.1
SMC4-214ENST00000472991 DLX5P56178 289 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 CLDN15P56746 228 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 BNIP1Q12981 228 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 NPTX1Q15818 432 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 ACSF3Q4G176 576 aaPredicted RBP8.17□□□□□ -1.1
SMC4-214ENST00000472991 ANKRD34AQ69YU3 496 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 GLYATQ6IB77 296 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 RTL6Q6ICC9 239 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 WBP2NLQ6ICG8 309 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 PLXDC2Q6UX71 529 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 B3GNT6Q6ZMB0 384 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 GGNQ86UU5 652 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 RANBP3LQ86VV4 465 aaPredicted RBP8.17□□□□□ -1.1
SMC4-214ENST00000472991 CARM1Q86X55 608 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 RBM45Q8IUH3 476 aaKnown RBP8.17□□□□□ -1.1
SMC4-214ENST00000472991 LILRA2Q8N149 483 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 OR52E4Q8NGH9 312 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 OR4D11Q8NGI4 311 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 OR6T1Q8NGN1 323 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 C3orf49Q96BT1 292 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 CLPTM1LQ96KA5 538 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 KLHL15Q96M94 604 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 DMRTA2Q96SC8 542 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 TUBA1CQ9BQE3 449 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 ZNF559Q9BR84 538 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 EVA1AQ9H8M9 152 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 ADPRHL2Q9NX46 363 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 RPS6KB2Q9UBS0 482 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 CHRNA9Q9UGM1 479 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 MAGEL2Q9UJ55 1249 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 ERRFI1Q9UJM3 462 aaPredicted RBP8.17□□□□□ -1.1
SMC4-214ENST00000472991 OSGIN1Q9UJX0 560 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 PRPF19Q9UMS4 504 aaKnown RBP8.17□□□□□ -1.1
SMC4-214ENST00000472991 SLC9A8Q9Y2E8 581 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 MEMO1Q9Y316 297 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 SH3GLB1Q9Y371 365 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 SNX13Q9Y5W8 968 aa8.17□□□□□ -1.1
SMC4-214ENST00000472991 TMED7-TICAM2A0A0A6YYA0 188 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 A0A1B0GWA3 101 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TMEM72A0PK05 275 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 CPSF4LA6NMK7 179 aaKnown RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 CLCA1A8K7I4 914 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 AHRRA9YTQ3 701 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 E9PLN8 166 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TNFSF11O14788 317 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 ARPC2O15144 300 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 GYG2O15488 501 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TPST2O60704 377 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TFPIP10646 304 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 SLC7A1P30825 629 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 PTGER4P35408 488 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 APOBEC1P41238 236 aaKnown RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 OR1E2P47887 323 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 NUP107P57740 925 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 RPS3AP61247 264 aaKnown RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 SELENOWP63302 87 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.19e-8■■□□□ 13.7
SMC4-214ENST00000472991 BNIP2Q12982 314 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 BCL2A1Q16548 175 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 FXNQ16595 210 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 CTU2Q2VPK5 515 aaKnown RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 TMEM176BQ3YBM2 270 aaPredicted RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 SPATS1Q496A3 300 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 DNAL1Q4LDG9 190 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 SYT14P1Q58G82 188 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 PPP4R4Q6NUP7 873 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 RPTNQ6XPR3 784 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 ESPNLQ6ZVH7 1005 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 CBLL1Q75N03 491 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 VTCN1Q7Z7D3 282 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 ADGRG3Q86Y34 549 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 EID3Q8N140 333 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 ARHGAP24Q8N264 748 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 MARVELD2Q8N4S9 558 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 OR10D3Q8NH80 312 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 OR2V1Q8NHB1 315 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 LZICQ8WZA0 190 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 CCDC124Q96CT7 223 aaKnown RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 CCDC120Q96HB5 630 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 ZNF845Q96IR2 970 aaPredicted RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 ADGRG7Q96K78 797 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 OR5B2Q96R09 309 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TRIB1Q96RU8 372 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 MCHR1Q99705 422 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 VKORC1Q9BQB6 163 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 THTPAQ9BU02 230 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TRIM2Q9C040 744 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 PCDHAC1Q9H158 963 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 COQ10BQ9H8M1 238 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms