RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 INAQ16352 499 aa4□□□□□ -1.77
SGCE-210ENST00000472326 KCTD19Q17RG1 926 aaPredicted RBP4□□□□□ -1.77
SGCE-210ENST00000472326 TP53I3Q53FA7 332 aa4□□□□□ -1.77
SGCE-210ENST00000472326 TSPO2Q5TGU0 170 aa4□□□□□ -1.77
SGCE-210ENST00000472326 KCNIP4Q6PIL6 250 aa4□□□□□ -1.77
SGCE-210ENST00000472326 STXBP6Q8NFX7 210 aa4□□□□□ -1.77
SGCE-210ENST00000472326 ARPC1AQ92747 370 aa4□□□□□ -1.77
SGCE-210ENST00000472326 NAT9Q9BTE0 207 aa4□□□□□ -1.77
SGCE-210ENST00000472326 ZNF416Q9BWM5 594 aa4□□□□□ -1.77
SGCE-210ENST00000472326 TMEM117Q9H0C3 514 aa4□□□□□ -1.77
SGCE-210ENST00000472326 TRAF3IP3Q9Y228 551 aa4□□□□□ -1.77
SGCE-210ENST00000472326 ATP8B3O60423 1300 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 IGHV3-64DA0A0J9YX35 117 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 LRATO95237 230 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 CXCR2P25025 360 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 HTR2AP28223 471 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 YWHABP31946 246 aaKnown RBP3.99□□□□□ -1.77
SGCE-210ENST00000472326 SHMT2P34897 504 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 PSG5Q15238 335 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 FAM71F2Q6NXP2 309 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 BLOC1S2Q6QNY1 142 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 LINC01551Q86U37 167 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 FTMTQ8N4E7 242 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 DHRSXQ8N5I4 330 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 CATSPER1Q8NEC5 780 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 OR10A7Q8NGE5 316 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 OR4D9Q8NGE8 314 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 FAM3CQ92520 227 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 MRPS31Q92665 395 aaKnown RBP3.99□□□□□ -1.77
SGCE-210ENST00000472326 FGF11Q92914 225 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 HIST1H4GQ99525 98 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 RIT2Q99578 217 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 ZNF670Q9BS34 389 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 HDHD3Q9BSH5 251 aaPredicted RBP3.99□□□□□ -1.77
SGCE-210ENST00000472326 SELENOIQ9C0D9 397 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 SLC17A5Q9NRA2 495 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 NUDT15Q9NV35 164 aa3.99□□□□□ -1.77
SGCE-210ENST00000472326 SMPD3Q9NY59 655 aaPredicted RBP3.99□□□□□ -1.77
SGCE-210ENST00000472326 NUFIP1Q9UHK0 495 aaKnown RBP3.99□□□□□ -1.77
SGCE-210ENST00000472326 AK6Q9Y3D8 172 aaKnown RBP3.99□□□□□ -1.77
SGCE-210ENST00000472326 ASTN1O14525 1302 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 SF3B1O75533 1304 aaKnown RBP eCLIP3.98□□□□□ -1.77
SGCE-210ENST00000472326 PDS5BQ9NTI5 1447 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 IGHV1OR21-1A0A087WYE8 117 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 TCP11X1B4DZS4 312 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 ICAM2P13598 275 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 NCF1P14598 390 aaPredicted RBP3.98□□□□□ -1.77
SGCE-210ENST00000472326 HSD17B7P56937 341 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 HERVK_113P61574 105 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 RPS14P62263 151 aaKnown RBP3.98□□□□□ -1.77
SGCE-210ENST00000472326 CNTN2Q02246 1040 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 CSTF1Q05048 431 aaKnown RBP3.98□□□□□ -1.77
SGCE-210ENST00000472326 GGTLC2Q14390 218 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 USH1GQ495M9 461 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 C11orf71Q6IPW1 123 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 TMIGD1Q6UXZ0 262 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 SYT10Q6XYQ8 523 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 RDH10Q8IZV5 341 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 CLDN19Q8N6F1 224 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 FADS6Q8N9I5 356 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 OR9G1Q8NH87 305 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 NDRG1Q92597 394 aaKnown RBP3.98□□□□□ -1.77
SGCE-210ENST00000472326 EDEM2Q9BV94 578 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 STAP1Q9ULZ2 295 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 MYO10Q9HD67 2058 aa3.98□□□□□ -1.77
SGCE-210ENST00000472326 MAP3K15Q6ZN16 1313 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 IGKV2-28A0A075B6P5 120 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 A0A096LNJ9 63 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 IGKV6-21A0A0C4DH24 114 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 C11orf94C9JXX5 98 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 DCTN6O00399 190 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 NBR2O15453 112 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 CLDN3O15551 220 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 WISP3O95389 354 aaPredicted RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 STAMBPO95630 424 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 IGKV2D-28P01615 120 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 CRISP2P16562 243 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 MAGP20916 626 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 PTGDSP41222 190 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 KPNA2P52292 529 aaKnown RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 PRSS41Q7RTY9 318 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 ZNF571Q7Z3V5 609 aaPredicted RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 RAET1EQ8TD07 263 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 SPRYD4Q8WW59 207 aaPredicted RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 OSTF1Q92882 214 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 TIMD4Q96H15 378 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 FAM210BQ96KR6 192 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 PELOQ9BRX2 385 aaKnown RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 OR11A1Q9GZK7 315 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 POLR1EQ9GZS1 481 aaKnown RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 EML4Q9HC35 981 aaKnown RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 TBK1Q9UHD2 729 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 MTCL1Q9Y4B5 1905 aaKnown RBP3.97□□□□□ -1.77
SGCE-210ENST00000472326 LAMC3Q9Y6N6 1575 aa3.97□□□□□ -1.77
SGCE-210ENST00000472326 ZNFX1Q9P2E3 1918 aaKnown RBP3.96□□□□□ -1.78
SGCE-210ENST00000472326 TRDCB7Z8K6 153 aa3.96□□□□□ -1.78
SGCE-210ENST00000472326 PPIAL4DF5H284 164 aa3.96□□□□□ -1.78
SGCE-210ENST00000472326 DLGAP1O14490 977 aa3.96□□□□□ -1.78
SGCE-210ENST00000472326 MAPK13O15264 365 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms