RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CPNE7Q9UBL6 633 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PHF3Q92576 2039 aaKnown RBP12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 A0A0J9YY10 115 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SIGLEC6O43699 453 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 IKZF1Q13422 519 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FGFBP1Q14512 234 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NAGSQ8N159 534 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR5D18Q8NGL1 313 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR6F1Q8NGZ6 308 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NXPE3Q969Y0 559 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ARSGQ96EG1 525 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SCPEP1Q9HB40 452 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR6C2Q9NZP2 312 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PPLO60437 1756 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FGF13Q92913 245 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 EHFQ9NZC4 300 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CHRNA9Q9UGM1 479 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GABRR3A8MPY1 467 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZFAND5O76080 213 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TFP02787 698 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ARSDP51689 593 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 AADACL3Q5VUY0 350 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FJX1Q86VR8 437 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RNF128Q8TEB7 428 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SPIN2AQ99865 258 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SPIN2BQ9BPZ2 258 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC6A17Q9H1V8 727 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 LGI1O95970 557 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GLB1L2Q8IW92 636 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ABHD11Q8NFV4 315 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FNDC9Q8TBE3 224 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NT5C3BQ969T7 300 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TMEM208Q9BTX3 173 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FBXO24O75426 580 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SCRG1O75711 98 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 AK1P00568 194 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TCN2P20062 427 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DPP4P27487 766 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HSF1Q00613 529 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SMUG1Q53HV7 270 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TECRLQ5HYJ1 363 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NCCRP1Q6ZVX7 275 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 UBAC2Q8NBM4 344 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RNF170Q96K19 258 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 KCNJ16Q9NPI9 418 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC6A14Q9UN76 642 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BCAT2O15382 392 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NDUFB2O95178 105 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NSA2O95478 260 aaKnown RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ITGB2P05107 769 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CDC34P49427 236 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DNAJB13P59910 316 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PACRGLQ8N7B6 248 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR4K5Q8NGD3 323 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR8J3Q8NGG0 315 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SECTM1Q8WVN6 248 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 YTHDF1Q9BYJ9 559 aaKnown RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 COQ4Q9Y3A0 265 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RGPD8O14715 1765 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PIRO00625 290 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OIP5O43482 229 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SPP1P10451 314 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ANKRD54Q6NXT1 300 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FBXO46Q6PJ61 603 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF704Q6ZNC4 412 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CCDC28AQ8IWP9 274 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PQLC3Q8N755 202 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 INTS14Q96SY0 518 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CPNE5Q9HCH3 593 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NOSIPQ9Y314 301 aaKnown RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PRAMEF4O60810 478 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CD6P30203 668 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MMP27Q9H306 513 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HRH4Q9H3N8 390 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 IL3RAP26951 378 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MAMDC4Q6UXC1 1216 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.4□□□□□ -0.424e-7■■■■□ 19.6
NPHP3-ACAD11-201ENST00000471702 C4orf47A7E2U8 309 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TK1P04183 234 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ETV4P43268 484 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CSN1S1P47710 185 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 EIF4HQ15056 248 aaKnown RBP12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 UNC50Q53HI1 259 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC2A11Q9BYW1 496 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC38A1Q9H2H9 487 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 STEAP1Q9UHE8 339 aa12.4□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RIMBP3CA6NJZ7 1639 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RIMBP3BA6NNM3 1639 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RIMBP3Q9UFD9 1639 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LRP5LA4QPB2 252 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TNFRSF4P43489 277 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TDGQ13569 410 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms