RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SMCO3A2RU48 225 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 FAM220BPB1ANY3 271 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 B4DXG7 233 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 GFYI3L273 518 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 K7ENP7 123 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 AKR7A2O43488 359 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 H6PDO95479 791 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 OXSR1O95747 527 aaPredicted RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 ADORA2BP29275 332 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 MAGEA1P43355 309 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 RPL29P47914 159 aaKnown RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 EFNA3P52797 238 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 ACLYP53396 1101 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 ATP12AP54707 1039 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 PKNOX1P55347 436 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 RGS8P57771 180 aaPredicted RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 PAX8Q06710 450 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 MRPL23Q16540 153 aaKnown RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 SLC8B1Q6J4K2 584 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 PGAP1Q75T13 922 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 Q8N377 158 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 COMMD1Q8N668 190 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 OR52K1Q8NGK4 314 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 OR56B4Q8NH76 319 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 TFB1MQ8WVM0 346 aaKnown RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 UFD1Q92890 307 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 ZBED6CLQ96FA7 236 aaPredicted RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 NOL4LQ96MY1 436 aaPredicted RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 KCNA7Q96RP8 456 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 C20orf24Q9BUV8 137 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 RBKSQ9H477 322 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 MIEF1Q9NQG6 463 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 HOXC10Q9NYD6 342 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 PTTG3PQ9NZH4 202 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 PDP1Q9P0J1 537 aaPredicted RBP5.22□□□□□ -1.57
SMC5-202ENST00000471372 COPS3Q9UNS2 423 aa5.22□□□□□ -1.57
SMC5-202ENST00000471372 PLEKHG2Q9H7P9 1386 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 A0A1B0GWB2 263 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 SUPT3HB4E1H0 165 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 TEX46H3BTG2 121 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 HCN1O60741 890 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 ZNF253O75346 499 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 GJB5O95377 273 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 IGHV1-2P23083 117 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 PTGDSP41222 190 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 ELK3P41970 407 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 RPS5P46782 204 aaKnown RBP5.21□□□□□ -1.58
SMC5-202ENST00000471372 IRX1P78414 480 aaPredicted RBP5.21□□□□□ -1.58
SMC5-202ENST00000471372 DOC2AQ14183 400 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 CHRNA6Q15825 494 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 GPRC6AQ5T6X5 926 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 OR2G6Q5TZ20 316 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 NIPA1Q7RTP0 329 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 SVOPLQ8N434 492 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 OR7G2Q8NG99 324 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 OR4C5Q8NGB2 326 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 ZPLD1Q8TCW7 415 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 SETD7Q8WTS6 366 aaKnown RBP5.21□□□□□ -1.58
SMC5-202ENST00000471372 HTR3CQ8WXA8 447 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 OXGR1Q96P68 337 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 ELOVL4Q9GZR5 314 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 NIPAL2Q9H841 368 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 FANCEQ9HB96 536 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 KCNIP3Q9Y2W7 256 aa5.21□□□□□ -1.58
SMC5-202ENST00000471372 INSRP06213 1382 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 ANKRD30BQ9BXX2 1392 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 A8MX80 341 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 SPECC1L-ADORA2AF8WAN1 911 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 EIF3HO15372 352 aaKnown RBP eCLIP5.2□□□□□ -1.58
SMC5-202ENST00000471372 PSTPIP1O43586 416 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 OR2J3O76001 311 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 POLR2MP0CAP2 368 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 DPEP1P16444 411 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 NPR2P20594 1047 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 HTR1FP30939 366 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 IST1P53990 364 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 EIF3EP60228 445 aaKnown RBP5.2□□□□□ -1.58
SMC5-202ENST00000471372 KCNJ2P63252 427 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 SPAG1Q07617 926 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 SCRN3Q0VDG4 424 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 OXA1LQ15070 435 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 TGFBIQ15582 683 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 TMEM53Q6P2H8 277 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 TPRX1Q8N7U7 411 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 ACMSDQ8TDX5 336 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 DNASE2BQ8WZ79 361 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 TGS1Q96RS0 853 aaKnown RBP5.2□□□□□ -1.58
SMC5-202ENST00000471372 RBM4BQ9BQ04 359 aaKnown RBP5.2□□□□□ -1.58
SMC5-202ENST00000471372 THUMPD1Q9NXG2 353 aaKnown RBP5.2□□□□□ -1.58
SMC5-202ENST00000471372 TBC1D24Q9ULP9 559 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 FRMPD3Q5JV73 1810 aa5.2□□□□□ -1.58
SMC5-202ENST00000471372 PLEKHH1Q9ULM0 1364 aa5.19□□□□□ -1.58
SMC5-202ENST00000471372 CDX4O14627 284 aaPredicted RBP5.19□□□□□ -1.58
SMC5-202ENST00000471372 TOM1O60784 492 aa5.19□□□□□ -1.58
SMC5-202ENST00000471372 C1orf105O95561 183 aa5.19□□□□□ -1.58
SMC5-202ENST00000471372 HOXD4P09016 255 aaPredicted RBP5.19□□□□□ -1.58
SMC5-202ENST00000471372 SLC35E2P0CK97 266 aa5.19□□□□□ -1.58
SMC5-202ENST00000471372 GCFC2P16383 781 aaKnown RBP5.19□□□□□ -1.58
SMC5-202ENST00000471372 ZNF43P17038 809 aa5.19□□□□□ -1.58
SMC5-202ENST00000471372 HOXD10P28358 340 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms