RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RADILQ96JH8 1075 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 HS6ST2Q96MM7 605 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 TRNT1Q96Q11 434 aaKnown RBP11.69□□□□□ -0.54
CPSF4-210ENST00000469897 OR52E6Q96RD3 313 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 SLC38A1Q9H2H9 487 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
CPSF4-210ENST00000469897 FAIMQ9NVQ4 179 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 OSGIN1Q9UJX0 560 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 SLC25A15Q9Y619 301 aa11.69□□□□□ -0.54
CPSF4-210ENST00000469897 FN1P02751 2386 aaKnown RBP11.68□□□□□ -0.54
CPSF4-210ENST00000469897 NAV3Q8IVL0 2385 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 GOLGA8QA0A0J9YX86 632 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 GOLGA8OA6NCC3 632 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 GOLGA8NF8WBI6 632 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 M0R1B8 84 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 TP53P04637 393 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-210ENST00000469897 PGRP06401 933 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 NR2F1P10589 423 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 IL7RP16871 459 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 PTAFRP25105 342 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 EPHA3P29320 983 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 TTKP33981 857 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 POLR2HP52434 150 aaKnown RBP11.68□□□□□ -0.54
CPSF4-210ENST00000469897 SLC16A1P53985 500 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 SLC35A1P78382 337 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 DMTNQ08495 405 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 SPOCK1Q08629 439 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 TNFAIP8L3Q5GJ75 292 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 AGAP6Q5VW22 663 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 TMEM108Q6UXF1 575 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 LRRC74BQ6ZQY2 392 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 DNM1P46Q6ZS02 220 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 SSX8Q7RTT4 187 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 SPATA19Q7Z5L4 167 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 DTX2Q86UW9 622 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 TRIML2Q8N7C3 387 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 ANKRD42Q8N9B4 389 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 HTRA1Q92743 480 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 PMM1Q92871 262 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 DDIT4LQ96D03 193 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 NAA11Q9BSU3 229 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-210ENST00000469897 GRIP2Q9C0E4 1043 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 SLC7A10Q9NS82 523 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 AIG1Q9NVV5 245 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 RLIMQ9NVW2 624 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 TAS2R16Q9NYV7 291 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 GPR45Q9Y5Y3 372 aa11.68□□□□□ -0.54
CPSF4-210ENST00000469897 ZC3H12DA2A288 527 aaKnown RBP11.67□□□□□ -0.54
CPSF4-210ENST00000469897 CFAP73A6NFT4 308 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 SDHDO14521 159 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 ZNF208O43345 1280 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 DNPH1O43598 174 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 GPRIN2O60269 458 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
CPSF4-210ENST00000469897 KITP10721 976 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 CD40P25942 277 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 SLC1A3P43003 542 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 IRX1P78414 480 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-210ENST00000469897 GNA13Q14344 377 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 TSPO2Q5TGU0 170 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 HHATQ5VTY9 493 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 OR7E24Q6IFN5 339 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 OGFOD2Q6N063 350 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 KLHL17Q6TDP4 642 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 CASP12Q6UXS9 341 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 CMIPQ8IY22 773 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 KIRREL3Q8IZU9 778 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 DHRS9Q9BPW9 319 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 RHNO1Q9BSD3 238 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 CACNG6Q9BXT2 260 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 ADAM19Q9H013 955 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 BARX1Q9HBU1 254 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-210ENST00000469897 PARPBPQ9NWS1 579 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 UPB1Q9UBR1 384 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 MGAT4BQ9UQ53 548 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 FLVCR1Q9Y5Y0 555 aa11.67□□□□□ -0.54
CPSF4-210ENST00000469897 RAI1Q7Z5J4 1906 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-210ENST00000469897 FAM234BA2RU67 622 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 DBIP07108 87 aaKnown RBP11.66□□□□□ -0.54
CPSF4-210ENST00000469897 ITGA5P08648 1049 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 GKN3PP0CG01 181 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 ANXA11P50995 505 aaKnown RBP11.66□□□□□ -0.54
CPSF4-210ENST00000469897 FABP6P51161 128 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 EPS8Q12929 822 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 CEACAM7Q14002 265 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 SLC17A1Q14916 467 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 RAB35Q15286 201 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 MAPK11Q15759 364 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 MRPL2Q5T653 305 aaKnown RBP11.66□□□□□ -0.54
CPSF4-210ENST00000469897 B3GLCTQ6Y288 498 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 VRK2Q86Y07 508 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 DEPDC4Q8N2C3 294 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 TMEM99Q8N816 258 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 WDR60Q8WVS4 1066 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 ADAD1Q96M93 576 aaKnown RBP11.66□□□□□ -0.54
CPSF4-210ENST00000469897 ZBTB18Q99592 522 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms