RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HDAC8Q9BY41 377 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ELOVL4Q9GZR5 314 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RAB6CQ9H0N0 254 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SLC25A51Q9H1U9 297 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MAGEH1Q9H213 219 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ACTL8Q9H568 366 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 LMAN1LQ9HAT1 526 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 GCM1Q9NP62 436 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 AMBNQ9NP70 447 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SEMA4BQ9NPR2 832 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RNF146Q9NTX7 359 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM100Q9NV29 134 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 UQCC1Q9NVA1 299 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SPATA6Q9NWH7 488 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 GPATCH2LQ9NWQ4 482 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 KLHL9Q9P2J3 617 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FBXL21Q9UKT6 434 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TCFL5Q9UL49 500 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ZDHHC8Q9ULC8 765 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 GOLT1BQ9Y3E0 138 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FBXO7Q9Y3I1 522 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CHST2Q9Y4C5 530 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 KCTD3Q9Y597 815 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 WIF1Q9Y5W5 379 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ENPP4Q9Y6X5 453 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 V9GYS6 101 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TNS1Q9HBL0 1735 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF831Q5JPB2 1677 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MIA3Q5JRA6 1907 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FXYD6-FXYD2A0A087WZ82 144 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 LRIT2A6NDA9 550 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CXorf65A6NEN9 183 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 POM121BA6NF01 834 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 F5H0A9 414 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 M0QZ92 97 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 M0R143 59 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ACOT7O00154 380 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GPR31O00270 319 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GABRPO00591 440 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 DVL1O14640 695 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FFAR3O14843 346 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GPR42O15529 346 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PPIHO43447 177 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 HCRTR2O43614 444 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ECI2O75521 394 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 STK16O75716 305 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ARL6IP5O75915 188 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFB6O95139 128 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PMS2P2O95744 297 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 JCHAINP01591 159 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OPN1MWP04001 364 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 IFNW1P05000 195 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CKMP06732 381 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ITGA5P08648 1049 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 HOXC6P09630 235 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 STAG3L1P0CL83 205 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OPN1MW2P0DN77 364 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OPN1MW3P0DN78 364 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MYCLP12524 364 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM11P17152 192 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TYMPP19971 482 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 HLA-DPA1P20036 260 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TBXA2RP21731 343 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 HMGB2P26583 209 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 EPHA2P29317 976 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CHI3L1P36222 383 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SERPINF1P36955 418 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MC3RP41968 323 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 XCR1P46094 333 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OMPP47874 163 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SELENOPP49908 381 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CAV2P51636 162 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CCR6P51684 374 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 WNT3P56703 355 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FKBP1AP62942 108 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CYCSP99999 105 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TNFRSF9Q07011 255 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ARHGAP1Q07960 439 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TWF1Q12792 350 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GAB1Q13480 694 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PMS2P11Q13670 270 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SERTAD2Q14140 314 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ARHGAP19Q14CB8 494 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 RBMS2Q15434 407 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 USF2Q15853 346 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 UGT8Q16880 541 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PRSS53Q2L4Q9 553 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GOLGA7BQ2TAP0 167 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GGTA1PQ4G0N0 100 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SLC39A12Q504Y0 691 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CRB2Q5IJ48 1285 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 C9orf152Q5JTZ5 239 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 UBE2NLQ5JXB2 153 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SPANXN4Q5MJ08 99 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MFSD14BQ5SR56 506 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GCNT6Q5T4J0 391 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GLT8D1Q68CQ7 371 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TANGO2Q6ICL3 276 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OR10K2Q6IF99 312 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 RAB12Q6IQ22 244 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms