RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 TMEM72A0PK05 275 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 SH3PXD2BA1X283 911 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 ELOA3DA6NLF2 546 aaPredicted RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 AHRRA9YTQ3 701 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 FTCDNL1E5RQL4 147 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 hCG_2039718K7EN88 272 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 KLF4O43474 513 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 MGRN1O60291 552 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 TRAPPC6AO75865 159 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 CST1P01037 141 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 MT-ND1P03886 318 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 DNAJA1P31689 397 aaKnown RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 RFC3P40938 356 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 AGFG1P52594 562 aaKnown RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 RAC3P60763 192 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 H3F3AP84243 136 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 FOXK1P85037 733 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 PRKCDQ05655 676 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 SF3B4Q15427 424 aaKnown RBP eCLIP10.14□□□□□ -0.794e-9■■■■□ 20.4
MSH5-214ENST00000468602 ELOA3BQ3SY89 546 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 FAM69AQ5T7M9 428 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 RAET1LQ5VY80 246 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 C1orf94Q6P1W5 598 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 TMPPEQ6ZT21 453 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 TMPRSS11FQ6ZWK6 438 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 MBOAT2Q6ZWT7 520 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 ZNF771Q7L3S4 317 aaPredicted RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 ZGRF1Q86YA3 2104 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 NKAIN4Q8IVV8 208 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 LILRA2Q8N149 483 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 CADM2Q8N3J6 435 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 ELOA3Q8NG57 546 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 TMEM239Q8WW34 195 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 CENPNQ96H22 339 aaPredicted RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 KLHL15Q96M94 604 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 BBC3Q96PG8 261 aaPredicted RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 PTDSS2Q9BVG9 487 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 PRR14Q9BWN1 585 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 DEFB127Q9H1M4 99 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 SLC6A15Q9H2J7 730 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 DCLRE1BQ9H816 532 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 COQ10BQ9H8M1 238 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 GP6Q9HCN6 339 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 MEPEQ9NQ76 525 aaPredicted RBP10.14□□□□□ -0.79
MSH5-214ENST00000468602 ASF1BQ9NVP2 202 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 SPRR3Q9UBC9 169 aa10.14□□□□□ -0.79
MSH5-214ENST00000468602 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 SPENQ96T58 3664 aaKnown RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 RP1L1Q8IWN7 2480 aaPredicted RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 TRAV36DV7A0A075B6V5 113 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 B8ZZF3 427 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 EIF1BO60739 113 aaKnown RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 WDR1O75083 606 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 GADD45GO95257 159 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 LDLRP01130 860 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 GABRA1P14867 456 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 IL11P20809 199 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 FPR1P21462 350 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 RRM2P31350 389 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 PDK3Q15120 406 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 MICAQ29983 383 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 DCST1Q5T197 706 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 PDSS1Q5T2R2 415 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 C1orf140Q5VVS0 124 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 SHQ1Q6PI26 577 aaKnown RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 TTC33Q6PID6 262 aaPredicted RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 SVOPLQ8N434 492 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 SCAIQ8N9R8 606 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 FAM57AQ8TBR7 257 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 CPT1CQ8TCG5 803 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 PYDC1Q8WXC3 89 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 DNAJC9Q8WXX5 260 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 ALPK1Q96QP1 1244 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 DGCR6LQ9BY27 220 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 GABARAPL1Q9H0R8 117 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 REEP1Q9H902 201 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 C6orf203Q9P0P8 240 aaPredicted RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 STX18Q9P2W9 335 aaKnown RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 NPIPA1Q9UND3 350 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 TMEM5Q9Y2B1 443 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 ZNF175Q9Y473 711 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 CORINQ9Y5Q5 1042 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 V9GYQ6 96 aa10.13□□□□□ -0.79
MSH5-214ENST00000468602 PRRC2CQ9Y520 2896 aaKnown RBP10.13□□□□□ -0.79
MSH5-214ENST00000468602 A0A0J9YW62 118 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 TRBV4-1A0A0J9YWV2 114 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 A0A1B0GTH9 108 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 NPIPB13A6NJU9 1138 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 CD8B2A6NJW9 211 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 LIPT2A6NK58 231 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 TTLL8A6PVC2 850 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 NPIPB4C9JG80 1138 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 TNFRSF11BO00300 401 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 CASQ2O14958 399 aaPredicted RBP10.12□□□□□ -0.79
MSH5-214ENST00000468602 WISP2O76076 250 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 BGLAPP02818 100 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 ASAH2BP0C7U1 165 aa10.12□□□□□ -0.79
MSH5-214ENST00000468602 POU3F2P20265 443 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms