RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 WDR4P57081 412 aaKnown RBP21.56■■□□□ 1.04
PTCH1-210ENST00000468211 HPCAP84074 193 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 H3F3AP84243 136 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 PPP2R2BQ00005 443 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 MAPK11Q15759 364 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 ZNF621Q6ZSS3 439 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 P2RY8Q86VZ1 359 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 ANKRD42Q8N9B4 389 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 OR52N5Q8NH56 324 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 PIGXQ8TBF5 258 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 ZHX1-C8orf76Q96EF9 292 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 OR52E6Q96RD3 313 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 MDFIQ99750 246 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 SLC6A13Q9NSD5 602 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 OSGIN1Q9UJX0 560 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 TMED7Q9Y3B3 224 aa21.56■■□□□ 1.04
PTCH1-210ENST00000468211 ZC3H12DA2A288 527 aaKnown RBP21.55■■□□□ 1.04
PTCH1-210ENST00000468211 PGRP06401 933 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 RPS4Y1P22090 263 aaKnown RBP21.55■■□□□ 1.04
PTCH1-210ENST00000468211 IDUAP35475 653 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 CLK1P49759 484 aaKnown RBP21.55■■□□□ 1.04
PTCH1-210ENST00000468211 CDH11P55287 796 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 SPOCK1Q08629 439 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 LRRC74BQ6ZQY2 392 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 DNM1P46Q6ZS02 220 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 DTX2Q86UW9 622 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 KIRREL3Q8IZU9 778 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 OR52E4Q8NGH9 312 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 REG4Q9BYZ8 158 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 TMEM181Q9P2C4 612 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 SLC25A15Q9Y619 301 aa21.55■■□□□ 1.04
PTCH1-210ENST00000468211 DNPH1O43598 174 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 TACR3P29371 465 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 ZNF83P51522 516 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 ETFDHQ16134 617 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 MRPL2Q5T653 305 aaKnown RBP21.54■■□□□ 1.04
PTCH1-210ENST00000468211 SPATA19Q7Z5L4 167 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 WDR60Q8WVS4 1066 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 ASB6Q9NWX5 421 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 MALT1Q9UDY8 824 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 RAB21Q9UL25 225 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 TRAPPC4Q9Y296 219 aa21.54■■□□□ 1.04
PTCH1-210ENST00000468211 CIB4A0PJX0 185 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 CCT8L1PA6NM43 557 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 E7EQL1 145 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 GPR171O14626 319 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 MRPL33O75394 65 aaKnown RBP21.53■■□□□ 1.04
PTCH1-210ENST00000468211 ITGA5P08648 1049 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 POLR2HP52434 150 aaKnown RBP21.53■■□□□ 1.04
PTCH1-210ENST00000468211 GABRA6Q16445 453 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 HHATQ5VTY9 493 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 CMIPQ8IY22 773 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 MTHFD2LQ9H903 347 aaPredicted RBP21.53■■□□□ 1.04
PTCH1-210ENST00000468211 RLIMQ9NVW2 624 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 B3GALT5Q9Y2C3 310 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 RTTNQ86VV8 2226 aa21.53■■□□□ 1.04
PTCH1-210ENST00000468211 PDLIM1O00151 329 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 SNNO75324 88 aaPredicted RBP21.52■■□□□ 1.04
PTCH1-210ENST00000468211 NR2F1P10589 423 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 KITP10721 976 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 FKBP2P26885 142 aaKnown RBP21.52■■□□□ 1.04
PTCH1-210ENST00000468211 MAGEA8P43361 318 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 HTR3AP46098 478 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 MVDP53602 400 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 EPS8Q12929 822 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 C9orf135Q5VTT2 229 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
PTCH1-210ENST00000468211 TRIML2Q8N7C3 387 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 MUS81Q96NY9 551 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 C1QTNF6Q9BXI9 259 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 GRIP2Q9C0E4 1043 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 ALG2Q9H553 416 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 TAS2R16Q9NYV7 291 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 FLVCR1Q9Y5Y0 555 aa21.52■■□□□ 1.04
PTCH1-210ENST00000468211 YLPM1P49750 1951 aaKnown RBP21.52■■□□□ 1.04
PTCH1-210ENST00000468211 FBN1P35555 2871 aaKnown RBP21.51■■□□□ 1.03
PTCH1-210ENST00000468211 FAAHO00519 579 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 HDAC3O15379 428 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 ZNF208O43345 1280 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 IL7RP16871 459 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 SLC1A3P43003 542 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 SLC35A1P78382 337 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 CASP12Q6UXS9 341 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 B3GLCTQ6Y288 498 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 SSX8Q7RTT4 187 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 VRK2Q86Y07 508 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 WDR31Q8NA23 367 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 DDIT4LQ96D03 193 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 ADAM19Q9H013 955 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 SLC7A10Q9NS82 523 aa21.51■■□□□ 1.03
PTCH1-210ENST00000468211 TMEM120BA0PK00 339 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 CFAP73A6NFT4 308 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 DBIP07108 87 aaKnown RBP21.5■■□□□ 1.03
PTCH1-210ENST00000468211 GKN3PP0CG01 181 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 CD40P25942 277 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 IRX1P78414 480 aaPredicted RBP21.5■■□□□ 1.03
PTCH1-210ENST00000468211 SLC25A3Q00325 362 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 SLC17A1Q14916 467 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 C11orf71Q6IPW1 123 aa21.5■■□□□ 1.03
PTCH1-210ENST00000468211 TMEM108Q6UXF1 575 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms