RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 BIRC5O15392 142 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 RGS16O15492 202 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-207ENST00000467819 DNPH1O43598 174 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 CD5LO43866 347 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 BGNP21810 368 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 MAGEA8P43361 318 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 NUDT6P53370 316 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 SLC16A1P53985 500 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 IRX1P78414 480 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-207ENST00000467819 SYPL1Q16563 259 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 NRF1Q16656 503 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 C9orf135Q5VTT2 229 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 KLHL17Q6TDP4 642 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 CASP12Q6UXS9 341 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 ANKFN1Q8N957 763 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 OR52E4Q8NGH9 312 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 ADAD1Q96M93 576 aaKnown RBP18.53■□□□□ 0.56
COL9A3-207ENST00000467819 RHNO1Q9BSD3 238 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 C1QTNF6Q9BXI9 259 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 TMEM181Q9P2C4 612 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 MALT1Q9UDY8 824 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 TMED7Q9Y3B3 224 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 ITGA5P08648 1049 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 DHRS4L1P0CG22 281 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 PTAFRP25105 342 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 CD40P25942 277 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 FKBP2P26885 142 aaKnown RBP18.52■□□□□ 0.56
COL9A3-207ENST00000467819 TTKP33981 857 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 CLK1P49759 484 aaKnown RBP18.52■□□□□ 0.56
COL9A3-207ENST00000467819 AP1ARQ63HQ0 302 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 C11orf71Q6IPW1 123 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 B3GLCTQ6Y288 498 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 HTRA1Q92743 480 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 ZBTB9Q96C00 473 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 TEX37Q96LM6 180 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 CCDC115Q96NT0 180 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 DHRS9Q9BPW9 319 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 SLC38A1Q9H2H9 487 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 PNPOQ9NVS9 261 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.52■□□□□ 0.56
COL9A3-207ENST00000467819 OSGIN1Q9UJX0 560 aa18.52■□□□□ 0.56
COL9A3-207ENST00000467819 V9GYY5 206 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-207ENST00000467819 STAB1Q9NY15 2570 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 IGHV4-30-2A0A087WSY4 118 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 TMEM72A0PK05 275 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 TM9SF1O15321 606 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 TLX2O43763 284 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-207ENST00000467819 CHRM4P08173 479 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 HTR3AP46098 478 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 POLR2HP52434 150 aaKnown RBP18.51■□□□□ 0.55
COL9A3-207ENST00000467819 UFM1P61960 85 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 GABRA6Q16445 453 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 FBXL14Q8N1E6 418 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 PNPT1Q8TCS8 783 aaKnown RBP18.51■□□□□ 0.55
COL9A3-207ENST00000467819 WDR60Q8WVS4 1066 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 DDIT4LQ96D03 193 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 PANX1Q96RD7 426 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 INPP5KQ9BT40 448 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 CBLN4Q9NTU7 201 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 UPB1Q9UBR1 384 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 BTNL2Q9UIR0 455 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 TRAPPC4Q9Y296 219 aa18.51■□□□□ 0.55
COL9A3-207ENST00000467819 CCDC154A6NI56 674 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 AGAP5A6NIR3 686 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 SNUPNO95149 360 aaKnown RBP18.5■□□□□ 0.55
COL9A3-207ENST00000467819 ALDOCP09972 364 aaKnown RBP18.5■□□□□ 0.55
COL9A3-207ENST00000467819 IMPDH2P12268 514 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 TACR3P29371 465 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 CDKN2CP42773 168 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 FABP6P51161 128 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 SLC35A1P78382 337 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 H3F3AP84243 136 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 STX3Q13277 289 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 OR7E24Q6IFN5 339 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 HMBOX1Q6NT76 420 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 WDR93Q6P2C0 686 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 CLEC2AQ6UVW9 174 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 CMIPQ8IY22 773 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 DEPDC4Q8N2C3 294 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 MUC15Q8N387 334 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 TRIML2Q8N7C3 387 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 MUS81Q96NY9 551 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 TRNT1Q96Q11 434 aaKnown RBP18.5■□□□□ 0.55
COL9A3-207ENST00000467819 NAA11Q9BSU3 229 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-207ENST00000467819 CENPHQ9H3R5 247 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 MEAF6Q9HAF1 191 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 SSU72Q9NP77 194 aaKnown RBP18.5■□□□□ 0.55
COL9A3-207ENST00000467819 HAO1Q9UJM8 370 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 SLC9A8Q9Y2E8 581 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 FLVCR1Q9Y5Y0 555 aa18.5■□□□□ 0.55
COL9A3-207ENST00000467819 ARFGEF3Q5TH69 2177 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 ZC3H12DA2A288 527 aaKnown RBP18.49■□□□□ 0.55
COL9A3-207ENST00000467819 FAM234BA2RU67 622 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 GPRIN2O60269 458 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 EIF1BO60739 113 aaKnown RBP18.49■□□□□ 0.55
COL9A3-207ENST00000467819 GSNP06396 782 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 IL7RP16871 459 aa18.49■□□□□ 0.55
COL9A3-207ENST00000467819 ANXA11P50995 505 aaKnown RBP18.49■□□□□ 0.55
COL9A3-207ENST00000467819 MRPL2Q5T653 305 aaKnown RBP18.49■□□□□ 0.55
COL9A3-207ENST00000467819 LRRC74BQ6ZQY2 392 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms