RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 VANGL1Q8TAA9 524 aaPredicted RBP13.37□□□□□ -0.27
DDX56-208ENST00000467318 FBLIM1Q8WUP2 373 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 MRGPRX4Q96LA9 322 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 MCHR1Q99705 422 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 WFDC6Q9BQY6 131 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 AMBRA1Q9C0C7 1298 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 TMEM27Q9HBJ8 222 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 SCN3BQ9NY72 215 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 VDAC3Q9Y277 283 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 PCDHGB1Q9Y5G3 927 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
DDX56-208ENST00000467318 ZFYVE26Q68DK2 2539 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 PCNX3Q9H6A9 2034 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 ETV2O00321 342 aaPredicted RBP13.37□□□□□ -0.27
DDX56-208ENST00000467318 ZIC3O60481 467 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX56-208ENST00000467318 TPST2O60704 377 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 TRAPPC6AO75865 159 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 ATE1O95260 518 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 SEMG1P04279 462 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 TNFRSF1BP20333 461 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 IGFBP5P24593 272 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 IFNA8P32881 189 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 SLC1A3P43003 542 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 HTR3AP46098 478 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 DLX5P56178 289 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 CD47Q08722 323 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 MOGQ16653 247 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 PLPPR5Q32ZL2 321 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 RNFT1Q5M7Z0 435 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 RBM45Q8IUH3 476 aaKnown RBP13.37□□□□□ -0.27
DDX56-208ENST00000467318 FAM83FQ8NEG4 500 aaPredicted RBP13.37□□□□□ -0.27
DDX56-208ENST00000467318 FAM81AQ8TBF8 368 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 BORCS5Q969J3 196 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 C7orf34Q96L11 122 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 OR2B2Q9GZK3 357 aa13.37□□□□□ -0.27
DDX56-208ENST00000467318 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 FAM166BA8MTA8 275 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 BCL10O95999 233 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 GP1BBP13224 206 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 PRKCAP17252 672 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 HK1P19367 917 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 YAP1P46937 504 aaKnown RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 IST1P53990 364 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 HOXC5Q00444 222 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 TOMM34Q15785 309 aaPredicted RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 NPTX1Q15818 432 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 ZNF829Q3KNS6 432 aaPredicted RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 ZNF613Q6PF04 617 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 DEF8Q6ZN54 512 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 GRINAQ7Z429 371 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 LSRQ86X29 649 aaPredicted RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 OR14L1PQ8NHC6 308 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 PHF10Q8WUB8 498 aaKnown RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 DNAJA4Q8WW22 397 aaPredicted RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 NR4A3Q92570 626 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 KLHDC3Q9BQ90 382 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 PIGQQ9BRB3 760 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 REEP1Q9H902 201 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 CCNB1IP1Q9NPC3 277 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 ACER3Q9NUN7 267 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 TBC1D23Q9NUY8 699 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 RPS6KB2Q9UBS0 482 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 TMEFF2Q9UIK5 374 aaPredicted RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 FAM32AQ9Y421 112 aaKnown RBP13.36□□□□□ -0.27
DDX56-208ENST00000467318 ENPP4Q9Y6X5 453 aa13.36□□□□□ -0.27
DDX56-208ENST00000467318 KMT2BQ9UMN6 2715 aaPredicted RBP13.35□□□□□ -0.27
DDX56-208ENST00000467318 SH3PXD2BA1X283 911 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 LINC01387J3KSC0 135 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 SLC1A7O00341 560 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 ZNF17P17021 662 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 RHCEP18577 417 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 HTR2AP28223 471 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 MAP2K6P52564 334 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 VLDLRP98155 873 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 CDK5R2Q13319 367 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 OR1Q1Q15612 314 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 ENTPD8Q5MY95 495 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 KDM4DQ6B0I6 523 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 XAF1Q6GPH4 301 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 ULK3Q6PHR2 472 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 TMEM179BQ7Z7N9 219 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 CYP4Z1Q86W10 505 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 CADM2Q8N3J6 435 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 GTPBP8Q8N3Z3 284 aaPredicted RBP13.35□□□□□ -0.27
DDX56-208ENST00000467318 FAR1Q8WVX9 515 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 MUL1Q969V5 352 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 ZNF300Q96RE9 604 aaPredicted RBP13.35□□□□□ -0.27
DDX56-208ENST00000467318 EPYCQ99645 322 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 ADAM19Q9H013 955 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 C12orf10Q9HB07 376 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 PALMDQ9NP74 551 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 SELENONQ9NZV5 590 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 NDUFAF4Q9P032 175 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 IGSF10Q6WRI0 2623 aa13.35□□□□□ -0.27
DDX56-208ENST00000467318 SUSD5O60279 629 aa13.34□□□□□ -0.27
DDX56-208ENST00000467318 HCN1O60741 890 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms