RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TMEM89A2RUT3 159 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ACOD1A6NK06 481 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 VWC2LB2RUY7 222 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 NDUFS8O00217 210 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 PSMD9O00233 223 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ERI3O43414 337 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 KRT34O76011 436 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 WDR47O94967 919 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CLEC3BP05452 202 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 APRTP07741 180 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 PRG2P13727 222 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CREB1P16220 341 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ITGA2P17301 1181 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 SRD5A2P31213 254 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 HNRNPH1P31943 449 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 MAGEA4P43358 317 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CAMLGP49069 296 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF81P51508 661 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 BLVRAP53004 296 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 PLTPP55058 493 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CLDN18P56856 261 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 SLC37A1P57057 533 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 RWDD2BP57060 319 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CDK16Q00536 496 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 SRYQ05066 204 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CHIT1Q13231 466 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CUL1Q13616 776 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 RBBP5Q15291 538 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 PGGHGQ32M88 737 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 NCMAPQ5T1S8 102 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 AGAP6Q5VW22 663 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 HIST2H2BDQ6DRA6 164 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 NEPROQ6NW34 567 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ZCCHC12Q6PEW1 402 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 TMIGD1Q6UXZ0 262 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 C4orf22Q6V702 233 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 STAC2Q6ZMT1 411 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CENPUQ71F23 418 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 PIWIL4Q7Z3Z4 852 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 KIAA1328Q86T90 577 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 YRDCQ86U90 279 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ST13P4Q8IZP2 240 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ARIH2OSQ8N7S6 290 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 STEAP2Q8NFT2 490 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 OR6Y1Q8NGX8 325 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 OR6K3Q8NGY3 331 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 OR14L1PQ8NHC6 308 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 C10orf105Q8TEF2 133 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 WDR60Q8WVS4 1066 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CDKL2Q92772 493 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 C3orf49Q96BT1 292 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 PYCR2Q96C36 320 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 CCDC42Q96M95 316 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 FRMD8P1Q9BZ68 369 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 TSGA10Q9BZW7 698 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ACTR6Q9GZN1 396 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 AICDAQ9GZX7 198 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 DPH5Q9H2P9 285 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 NT5DC2Q9H857 520 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 SEPSECSQ9HD40 501 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 TEX10Q9NXF1 929 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 MS4A12Q9NXJ0 267 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 ARL15Q9NXU5 204 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 TAS2R10Q9NYW0 307 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 TESQ9UGI8 421 aaKnown RBP4.81□□□□□ -1.64
PTCD3-207ENST00000467273 STEAP1Q9UHE8 339 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 KCNE2Q9Y6J6 123 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 EXPH5Q8NEV8 1989 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 MALRD1Q5VYJ5 2156 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 MED12Q93074 2177 aa4.81□□□□□ -1.64
PTCD3-207ENST00000467273 C2orf92A0A1B0GVN3 265 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 hCG_1809904A0A1W2PP81 198 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 A0A1W2PPE2 198 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 A0A1W2PR64 198 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 A0A1W2PRV1 198 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 ANKDD1BA6NHY2 528 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 NCF1BA6NI72 391 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 NCF1CA8MVU1 366 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GOLGA8TH3BQL2 631 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 H7C417 338 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 KIAA0513O60268 411 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 LDB3O75112 727 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 NDUFS7O75251 213 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 SCELO95171 688 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 CD8AP01732 235 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 CHRM2P08172 466 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 VIMP08670 466 aaKnown RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 IL6RP08887 468 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 PEPDP12955 493 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GNAZP19086 355 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 PCMT1P22061 227 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 CERS1P27544 350 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 NMBRP28336 390 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 PSMB10P40306 273 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GRIA1P42261 906 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 PLA2G16P53816 162 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 FBXW4P57775 412 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 RPS13P62277 151 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms