RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MCHR1Q99705 422 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 SLC35A5Q9BS91 424 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 NICN1Q9BSH3 213 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 TUBGCP2Q9BSJ2 902 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 TMEM43Q9BTV4 400 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 CAPS2Q9BXY5 557 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 SRXN1Q9BYN0 137 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 POLR2J2Q9GZM3 115 aaKnown RBP1.42□□□□□ -2.18
CCDC93-205ENST00000466171 MAGT1Q9H0U3 335 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 POLR2J3Q9H1A7 115 aaKnown RBP1.42□□□□□ -2.18
CCDC93-205ENST00000466171 LRRN3Q9H3W5 708 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 EHD1Q9H4M9 534 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 SMYD3Q9H7B4 428 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 ZNF702PQ9H963 129 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 LRRC40Q9H9A6 602 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 CYTL1Q9NRR1 136 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 UFSP2Q9NUQ7 469 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 TREM2Q9NZC2 230 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 CD274Q9NZQ7 290 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 C6orf203Q9P0P8 240 aaPredicted RBP1.42□□□□□ -2.18
CCDC93-205ENST00000466171 PIPOXQ9P0Z9 390 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 ONECUT1Q9UBC0 465 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 PHF11Q9UIL8 331 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 CDH9Q9ULB4 789 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 PRPF19Q9UMS4 504 aaKnown RBP1.42□□□□□ -2.18
CCDC93-205ENST00000466171 ERVW-1Q9UQF0 538 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 TRAF3IP3Q9Y228 551 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 CA5BQ9Y2D0 317 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 IFT52Q9Y366 437 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 TIMM10BQ9Y5J6 103 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 SLCO1B1Q9Y6L6 691 aa1.42□□□□□ -2.18
CCDC93-205ENST00000466171 DDX49Q9Y6V7 483 aaKnown RBP1.42□□□□□ -2.18
CCDC93-205ENST00000466171 RPAP1Q9BWH6 1393 aaPredicted RBP1.42□□□□□ -2.18
CCDC93-205ENST00000466171 TRAV26-1A0A087WT03 109 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 A0A1B0GVL5 298 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 EPOPA6NHQ4 379 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 PCP4L1A6NKN8 68 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 TRDCB7Z8K6 153 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 TAPBPO15533 448 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 MBTPS2O43462 519 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 MED7O43513 233 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 CXCL13O43927 109 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 ECI2O75521 394 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 FOXH1O75593 365 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 SURF6O75683 361 aaKnown RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 DIRAS1O95057 198 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 LALBAP00709 142 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 IGHDP01880 384 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 SEMG1P04279 462 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 NR2C1P13056 603 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 GCFC2P16383 781 aaKnown RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 MDKP21741 143 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 GNA11P29992 359 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 HTR1FP30939 366 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 CD80P33681 288 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 RPL13AP40429 203 aaKnown RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 MAGEA8P43361 318 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 GSSP48637 474 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 PLK1P53350 603 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 PKNOX1P55347 436 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 CSNK1G2P78368 415 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 ZNF45Q02386 682 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 TGFBR3Q03167 851 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 CKAP4Q07065 602 aaKnown RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 NCBP1Q09161 790 aaKnown RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 PLD1Q13393 1074 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 RIPK1Q13546 671 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 HERPUD1Q15011 391 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 ARL6IP1Q15041 203 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 PDK3Q15120 406 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 DPYSL2Q16555 572 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 SPATA46Q5T0L3 261 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 PDZK1Q5T2W1 519 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 BEND3Q5T5X7 828 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 METTL11BQ5VVY1 283 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 UQCC3Q6UW78 93 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 HSDL2Q6YN16 418 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 ZNF571Q7Z3V5 609 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 C17orf82Q86X59 251 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 VRK2Q86Y07 508 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 TGIF2LYQ8IUE0 185 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 ZNF679Q8IYX0 411 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 OR2L13Q8N349 312 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 SVOPLQ8N434 492 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 FTMTQ8N4E7 242 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 Q8N9L7 120 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 BHLHE23Q8NDY6 225 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 OR52H1Q8NGJ2 320 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 OR52I1Q8NGK6 324 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 OR5D13Q8NGL4 314 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 OR9A1PQ8NGU1 263 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 ZNF564Q8TBZ8 553 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 SCFD1Q8WVM8 642 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 HTR3CQ8WXA8 447 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 DCUN1D4Q92564 292 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 MRPS31Q92665 395 aaKnown RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 EFHD2Q96C19 240 aaPredicted RBP1.41□□□□□ -2.18
CCDC93-205ENST00000466171 SLC38A2Q96QD8 506 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 CLCC1Q96S66 551 aa1.41□□□□□ -2.18
CCDC93-205ENST00000466171 RNF2Q99496 336 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms