RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 GPR151Q8TDV0 419 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 DUSP19Q8WTR2 217 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 PHF10Q8WUB8 498 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SDCCAG3Q96C92 435 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 THOC1Q96FV9 657 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 WDYHV1Q96HA8 205 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 MS4A4EQ96PG1 132 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 TRIB1Q96RU8 372 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 TTYH2Q9BSA4 534 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 INPP5KQ9BT40 448 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 RSPO3Q9BXY4 272 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ZCCHC3Q9NUD5 404 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 AIG1Q9NVV5 245 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 THAP1Q9NVV9 213 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 GIN1Q9NXP7 522 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 QPCTLQ9NXS2 382 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ALKBH4Q9NXW9 302 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ACAD8Q9UKU7 415 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 EIF3LQ9Y262 564 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 RPH3AQ9Y2J0 694 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 OR10H1Q9Y4A9 318 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SNX8Q9Y5X2 465 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ANKHD1Q8IWZ3 2542 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SPG11Q96JI7 2443 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 TEP1Q99973 2627 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 NPIPB9F8W1W9 429 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 KLF11O14901 512 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 HDAC3O15379 428 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CFLARO15519 480 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 FCMRO60667 390 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 COQ9O75208 318 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CBR3O75828 277 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SNX4O95219 450 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CLDN14O95500 239 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CPSF4O95639 269 aaKnown RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ANGPTL1O95841 491 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OPN1LWP04000 364 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 HOXB9P17482 250 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 IL11P20809 199 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 PRPS1L1P21108 318 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 DPP4P27487 766 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SHC1P29353 583 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SOAT1P35610 550 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 LHX2P50458 406 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF81P51508 661 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF136P52737 540 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 MVDP53602 400 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 DLX5P56178 289 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CLDN18P56856 261 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CLDN20P56880 219 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 KRTAP10-9P60411 292 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF117Q03924 483 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SRYQ05066 204 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SNTA1Q13424 505 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ART3Q13508 389 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 EFR3AQ14156 821 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 TOMM20Q15388 145 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNHIT3Q15649 155 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 MAPK11Q15759 364 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 TOMM34Q15785 309 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 MAPK14Q16539 360 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF630Q2M218 657 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 TMEM44Q2T9K0 475 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 FAM174BQ3ZCQ3 159 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 GTDC1Q4AE62 458 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ACSF3Q4G176 576 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 NHSL2Q5HYW2 709 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 DCST2Q5T1A1 773 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 C1orf185Q5T7R7 199 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ATG16L1Q676U5 607 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 NXNQ6DKJ4 435 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CDC73Q6P1J9 531 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CBLN3Q6UW01 205 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 EPGNQ6UW88 154 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 B3GNT6Q6ZMB0 384 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 C6orf120Q7Z4R8 191 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CROCCP2Q86T23 111 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 FUNDC1Q8IVP5 155 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 C10orf111Q8N326 155 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 CDRT4Q8N9R6 151 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 C9orf106Q8NAJ2 232 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ACBD4Q8NC06 268 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 RELL2Q8NC24 303 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OR8J2Q8NGG1 315 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OR4A15Q8NGL6 344 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OR10Q1Q8NGQ4 319 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OR14L1PQ8NHC6 308 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 POC1BQ8TC44 478 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SFXN5Q8TD22 340 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SCARB1Q8WTV0 552 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OR5P2Q8WZ92 322 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 RAB8BQ92930 207 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 ABTB1Q969K4 478 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 VPS33AQ96AX1 596 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 TESCQ96BS2 214 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 TMCO6Q96DC7 493 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 SH3YL1Q96HL8 342 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 OR7D2Q96RA2 312 aa4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 VRK1Q99986 396 aaPredicted RBP4.31□□□□□ -1.72
EXOSC3-204ENST00000465860 TUBA1CQ9BQE3 449 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms