RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 HMGA2P52926 109 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 CLDN20P56880 219 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 CTU2Q2VPK5 515 aaKnown RBP13.23□□□□□ -0.29
HLA-F-223ENST00000465459 GXYLT1Q4G148 440 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 TTC33Q6PID6 262 aaPredicted RBP13.23□□□□□ -0.29
HLA-F-223ENST00000465459 ZGRF1Q86YA3 2104 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 RNF113BQ8IZP6 322 aaKnown RBP13.23□□□□□ -0.29
HLA-F-223ENST00000465459 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 OR2V1Q8NHB1 315 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 RNF217Q8TC41 542 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 SLCO4A1Q96BD0 722 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 ADGRG7Q96K78 797 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 KLHL4Q9C0H6 718 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 TMEM185BQ9H7F4 350 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 MAN2C1Q9NTJ4 1040 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
HLA-F-223ENST00000465459 CFAP46Q8IYW2 2715 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 IGKV1D-42A0A075B6H8 117 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 A0A0J9YW62 118 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 H0Y3Z8 333 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 EIF1AYO14602 144 aaKnown RBP13.22□□□□□ -0.29
HLA-F-223ENST00000465459 HNRNPRO43390 633 aaKnown RBP13.22□□□□□ -0.29
HLA-F-223ENST00000465459 GADD45GO95257 159 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 AHSA1O95433 338 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 PMS2P2O95744 297 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 TPOP07202 933 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 FCGR1AP12314 374 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 CCNA2P20248 432 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 SFTPDP35247 375 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 CASP6P55212 293 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 CLDN15P56746 228 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 RAC3P60763 192 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 CSNK2A1P68400 391 aaPredicted RBP13.22□□□□□ -0.29
HLA-F-223ENST00000465459 EGR4Q05215 589 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 MFSD13AQ14CX5 517 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 C1orf140Q5VVS0 124 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 WDR88Q6ZMY6 472 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 TMPPEQ6ZT21 453 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 ZNF771Q7L3S4 317 aaPredicted RBP13.22□□□□□ -0.29
HLA-F-223ENST00000465459 CHMP1BQ7LBR1 199 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 ATCAYQ86WG3 371 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 NKAIN4Q8IVV8 208 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 UBQLNLQ8IYU4 475 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 ATP6V1C2Q8NEY4 427 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 TMEM239Q8WW34 195 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 ACOT11Q8WXI4 607 aaPredicted RBP13.22□□□□□ -0.29
HLA-F-223ENST00000465459 SMPDL3BQ92485 455 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 OR5B2Q96R09 309 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 UCN2Q96RP3 112 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 TP63Q9H3D4 680 aaPredicted RBP13.22□□□□□ -0.29
HLA-F-223ENST00000465459 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
HLA-F-223ENST00000465459 TRAV36DV7A0A075B6V5 113 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 ZC3H12DA2A288 527 aaKnown RBP13.21□□□□□ -0.29
HLA-F-223ENST00000465459 SEC14L5O43304 696 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 FZD7O75084 574 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 DIRAS1O95057 198 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 CST1P01037 141 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 SHC1P29353 583 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 RRM2P31350 389 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 IDUAP35475 653 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 SUCLG1P53597 346 aaKnown RBP13.21□□□□□ -0.29
HLA-F-223ENST00000465459 CARD18P57730 90 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 SPIBQ01892 262 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 SRYQ05066 204 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 MYBPHQ13203 477 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 EMC4Q5J8M3 183 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 FAM69AQ5T7M9 428 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 HBMQ6B0K9 141 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 ADGRE4PQ86SQ3 457 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 LINC00471Q8N535 108 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 OR10D3Q8NH80 312 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 MFSD8Q8NHS3 518 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 SLC7A13Q8TCU3 470 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 OSTF1Q92882 214 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.29
HLA-F-223ENST00000465459 ARL5BQ96KC2 179 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 OR11A1Q9GZK7 315 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 CALHM2Q9HA72 323 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 PNPLA3Q9NST1 481 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 RHCGQ9UBD6 479 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 DNAJB9Q9UBS3 223 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 MED31Q9Y3C7 131 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 ZNF175Q9Y473 711 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 TESMINQ9Y4I5 508 aa13.21□□□□□ -0.29
HLA-F-223ENST00000465459 CD8B2A6NJW9 211 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 LIPT2A6NK58 231 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 SULT2B1O00204 365 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 TNFSF11O14788 317 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
HLA-F-223ENST00000465459 DEAF1O75398 565 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-223ENST00000465459 MT-ATP6P00846 226 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 MT-ND1P03886 318 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 OPN1LWP04000 364 aa13.2□□□□□ -0.3
HLA-F-223ENST00000465459 STSP08842 583 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms