RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 EFNA2O43921 213 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 RCBTB2O95199 551 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 IL11P20809 199 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 SLC1A3P43003 542 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 GSK3BP49841 420 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 SUCLG1P53597 346 aaKnown RBP15.88■□□□□ 0.13
COL7A1-205ENST00000465238 SLC25A3Q00325 362 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 SELENBP1Q13228 472 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 SGCBQ16585 318 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 GLIPR1L2Q4G1C9 344 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 WBP2NLQ6ICG8 309 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 PGAM4Q8N0Y7 254 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 CADM2Q8N3J6 435 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 TAMM41Q96BW9 452 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 MBD6Q96DN6 1003 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 KCTD14Q9BQ13 255 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-205ENST00000465238 RSPO3Q9BXY4 272 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-205ENST00000465238 TMEM181Q9P2C4 612 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 ABCD2Q9UBJ2 740 aa15.88■□□□□ 0.13
COL7A1-205ENST00000465238 SPIN1Q9Y657 262 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-205ENST00000465238 CLCA1A8K7I4 914 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 H0YC42 278 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 C8BP07358 591 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 PRG2P13727 222 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 KLK2P20151 261 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 CALB2P22676 271 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 KDELR2P33947 212 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 SFTPDP35247 375 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 KCNJ5P48544 419 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 POLR2HP52434 150 aaKnown RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 TPD52P55327 224 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 CLDN15P56746 228 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 RGS8P57771 180 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 FOXF2Q12947 444 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 DUSP7Q16829 419 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 TMEM176BQ3YBM2 270 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 EEF1A1P5Q5VTE0 462 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 PAMR1Q6UXH9 720 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 ESPNLQ6ZVH7 1005 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 GGNQ86UU5 652 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 LINC01560Q8TB33 94 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 KLHL15Q96M94 604 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 RBM24Q9BX46 236 aaKnown RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 CTPS2Q9NRF8 586 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 PAQR5Q9NXK6 330 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 GMPR2Q9P2T1 348 aaKnown RBP15.87■□□□□ 0.13
COL7A1-205ENST00000465238 CLCF1Q9UBD9 225 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 RPS6KB2Q9UBS0 482 aa15.87■□□□□ 0.13
COL7A1-205ENST00000465238 CXCR6O00574 342 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 LGI1O95970 557 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 RAF1P04049 648 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 FKBP2P26885 142 aaKnown RBP15.86■□□□□ 0.13
COL7A1-205ENST00000465238 TACR3P29371 465 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 EIF1AXP47813 144 aaKnown RBP15.86■□□□□ 0.13
COL7A1-205ENST00000465238 NCALDP61601 193 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 HOXC5Q00444 222 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 LRRC23Q53EV4 343 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-205ENST00000465238 HBMQ6B0K9 141 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 C3orf33Q6P1S2 294 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 P4HA3Q7Z4N8 544 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 DEFB107AQ8IZN7 70 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 OR2V1Q8NHB1 315 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 SLC25A43Q8WUT9 341 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-205ENST00000465238 FIG4Q92562 907 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 INTS12Q96CB8 462 aaKnown RBP15.86■□□□□ 0.13
COL7A1-205ENST00000465238 CDRT15Q96T59 188 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 ADAM19Q9H013 955 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 PIGMQ9H3S5 423 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 CHRNA9Q9UGM1 479 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 BAG5Q9UL15 447 aa15.86■□□□□ 0.13
COL7A1-205ENST00000465238 TMED7-TICAM2A0A0A6YYA0 188 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 A0A0J9YW62 118 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 TNFSF11O14788 317 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 ADAMDEC1O15204 470 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 GMNNO75496 209 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 T-ENOLP0DO92 83 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 TFPIP10646 304 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 CCNA2P20248 432 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 CD247P20963 164 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 CXCR1P25024 350 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 SLC7A1P30825 629 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 CARD18P57730 90 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 KRTAP21-3Q3LHN1 58 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 SAMD4BQ5PRF9 694 aaKnown RBP15.85■□□□□ 0.13
COL7A1-205ENST00000465238 LUZP2Q86TE4 346 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 COMTD1Q86VU5 262 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 RANBP3LQ86VV4 465 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-205ENST00000465238 ADGRG3Q86Y34 549 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 RNF148Q8N7C7 305 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 GPR32P1Q8NGA4 272 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 OR52E4Q8NGH9 312 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 OR10D3Q8NH80 312 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 PROX1Q92786 737 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 OSTF1Q92882 214 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 DACH2Q96NX9 599 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 PRRG4Q9BZD6 226 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 TRIM2Q9C040 744 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 TIGARQ9NQ88 270 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 GALNT8Q9NY28 637 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 TESQ9UGI8 421 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms