RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 IGHV1-2P23083 117 aa22.88■■□□□ 1.25
U2AF1-206ENST00000464750 STK11Q15831 433 aa22.88■■□□□ 1.25
U2AF1-206ENST00000464750 SLC2A7Q6PXP3 512 aa22.88■■□□□ 1.25
U2AF1-206ENST00000464750 AKAP1Q92667 903 aaKnown RBP eCLIP22.88■■□□□ 1.25
U2AF1-206ENST00000464750 GTF2H4Q92759 462 aa22.88■■□□□ 1.25
U2AF1-206ENST00000464750 C18orf12Q96KH6 178 aa22.88■■□□□ 1.25
U2AF1-206ENST00000464750 PAIP1Q9H074 479 aaKnown RBP22.88■■□□□ 1.25
U2AF1-206ENST00000464750 ZNF443Q9Y2A4 671 aaPredicted RBP22.88■■□□□ 1.25
U2AF1-206ENST00000464750 RNF115Q9Y4L5 304 aa22.88■■□□□ 1.25
U2AF1-206ENST00000464750 RAMP1O60894 148 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 CNOT4O95628 575 aaKnown RBP22.87■■□□□ 1.25
U2AF1-206ENST00000464750 GKN3PP0CG01 181 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 MRPL19P49406 292 aaKnown RBP22.87■■□□□ 1.25
U2AF1-206ENST00000464750 NCMAPQ5T1S8 102 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 SEZ6L2Q6UXD5 910 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 CCDC103Q8IW40 242 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 ZNF611Q8N823 705 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 TMEM171Q8WVE6 324 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 IGFBPL1Q8WX77 278 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 APH1AQ96BI3 265 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 EBF4Q9BQW3 602 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 ESRP2Q9H6T0 727 aaKnown RBP22.87■■□□□ 1.25
U2AF1-206ENST00000464750 THUMPD1Q9NXG2 353 aaKnown RBP22.87■■□□□ 1.25
U2AF1-206ENST00000464750 TRAPPC4Q9Y296 219 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 PCDHB14Q9Y5E9 798 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 CADP27708 2225 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 USF3Q68DE3 2245 aa22.87■■□□□ 1.25
U2AF1-206ENST00000464750 ZC3H12DA2A288 527 aaKnown RBP22.86■■□□□ 1.25
U2AF1-206ENST00000464750 TMEM247A6NEH6 219 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 GPR171O14626 319 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 CLOCKO15516 846 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 TGDSO95455 350 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 IGHV3-9P01782 118 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 IMPDH2P12268 514 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 IDH3AP50213 366 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 SLC16A1P53985 500 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 SLC35A1P78382 337 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 RNF220Q5VTB9 566 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 YTHDF3Q7Z739 585 aaKnown RBP22.86■■□□□ 1.25
U2AF1-206ENST00000464750 ATG4DQ86TL0 474 aaPredicted RBP22.86■■□□□ 1.25
U2AF1-206ENST00000464750 GSX2Q9BZM3 304 aa22.86■■□□□ 1.25
U2AF1-206ENST00000464750 CACYBPQ9HB71 228 aaKnown RBP22.86■■□□□ 1.25
U2AF1-206ENST00000464750 CD3EP07766 207 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 THBS1P07996 1170 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 NUDT7P0C024 238 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 PTH2RP49190 550 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 MAP2K6P52564 334 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 LARS2Q15031 903 aaKnown RBP22.85■■□□□ 1.25
U2AF1-206ENST00000464750 FBXW9Q5XUX1 488 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 BIVMQ86UB2 503 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 UBE2J2Q8N2K1 259 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 CADM2Q8N3J6 435 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 DYDC1Q8WWB3 177 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 Q96MF0 132 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 ADAM19Q9H013 955 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 RAD21L1Q9H4I0 556 aa22.85■■□□□ 1.25
U2AF1-206ENST00000464750 A0A0G2JPF8 293 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 HNRNPCL2B2RXH8 293 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 HNRNPCL3B7ZW38 293 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 CLIC1O00299 241 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 EIF1BO60739 113 aaKnown RBP22.84■■□□□ 1.25
U2AF1-206ENST00000464750 HNRNPCL1O60812 293 aaKnown RBP22.84■■□□□ 1.25
U2AF1-206ENST00000464750 HNRNPCL4P0DMR1 293 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 HOXB9P17482 250 aaPredicted RBP22.84■■□□□ 1.25
U2AF1-206ENST00000464750 GGT1P19440 569 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 ADSLP30566 484 aaPredicted RBP22.84■■□□□ 1.25
U2AF1-206ENST00000464750 ACAA2P42765 397 aaKnown RBP22.84■■□□□ 1.25
U2AF1-206ENST00000464750 H3F3AP84243 136 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 PPA1Q15181 289 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 RGNQ15493 299 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 PRSS57Q6UWY2 283 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 CLIP4Q8N3C7 705 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 GOLGA6L1Q8N7Z2 621 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 NAA11Q9BSU3 229 aaPredicted RBP22.84■■□□□ 1.25
U2AF1-206ENST00000464750 CCDC28BQ9BUN5 200 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 CXorf56Q9H5V9 222 aa22.84■■□□□ 1.25
U2AF1-206ENST00000464750 A0A096LPI6 279 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 NR5A2O00482 541 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 MRPL33O75394 65 aaKnown RBP22.83■■□□□ 1.25
U2AF1-206ENST00000464750 INHBBP09529 407 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 CXCR1P25024 350 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 AQP5P55064 265 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 COPZ1P61923 177 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 BSPH1Q075Z2 132 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 FADDQ13158 208 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 ZSWIM7Q19AV6 140 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 TIMM23BQ5SRD1 257 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 WBP2NLQ6ICG8 309 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 ADAM5Q6NVV9 412 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 CASP12Q6UXS9 341 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 FUNDC1Q8IVP5 155 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 ZNF433Q8N7K0 673 aaPredicted RBP22.83■■□□□ 1.25
U2AF1-206ENST00000464750 LILRB1Q8NHL6 650 aaPredicted RBP22.83■■□□□ 1.25
U2AF1-206ENST00000464750 MAL2Q969L2 176 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 SMR3AQ99954 134 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 SPATA9Q9BWV2 254 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 A4GALTQ9NPC4 353 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 CHST2Q9Y4C5 530 aa22.83■■□□□ 1.25
U2AF1-206ENST00000464750 RAD51DO75771 328 aa22.82■■□□□ 1.24
U2AF1-206ENST00000464750 BMP2P12643 396 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms